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The map label for this gene is fliH [H]

Identifier: 117919792

GI number: 117919792

Start: 1557627

End: 1558589

Strand: Direct

Name: fliH [H]

Synonym: Shewana3_1344

Alternate gene names: 117919792

Gene position: 1557627-1558589 (Clockwise)

Preceding gene: 117919791

Following gene: 117919793

Centisome position: 31.33

GC content: 51.09

Gene sequence:

>963_bases
ATGAGTTCCTCTAATCGGAGTGACAATAGCGACAATAAATTGTCCCATCGGGTGGTGAGCGACTCGGAGATCGAGTTCAG
CCATTGGCAATTACCCGATGTGACCCAAACCGAAGAGGTGAGTATTTCAAACCTCTTTGGTTATTCGCCGCAGCAAGCGC
CGAAGGCGGTGGCCGCCGAAACCATTGCGCCACCCACCATGGCGGAAATTGAAGATATTCGCGCTCAAGCCGAAGAAGAA
GGTTTTAACGAAGGTAAGACGCAAGGTTATGCCGAAGGACTGGAGCAGGGCAGACTCGAAGGTTTAGAGCAAGGCCATAC
CGAGGGCCTAGCCCAAGGTCATGAGCAAGGGCTTGAGGCTGGGCTTGCTGAAGCCAAGGCATTAGTCAGCCGCTTCGAAG
GACTGTTAAGCCAATTTGAAAAGCCATTGCAATTACTCGATGGCGATATTGAACATTCCTTAATGACACTCACTATGGCG
CTGGCCAAATCTGTGATTGGTCATGAACTTAAAACTCATCCAGAACAAATCCTGTCGGCGCTACGTTTAGGGGTCGAATC
TCTGCCAATCAAGGAGCAAAGCGTCAGTATTCGCATGCATCCCGATGATGTTGCCTTGGTGGAGCAGCTATATTCCAGTA
CCCAATTGAACCGTAATCAGTGGCAGTTAGAGGCCGATCCCAGCTTAAATTCTGGGGATTGTATTATCAGCAGCCAACGC
TCGCTGGTGGACTTAACCCTGTCCTCGCGCATCGATGCGGTGTTTGAGTCCTTACGTAATCAACAGTCCCATTTGAGTCA
CCAGCAGCAACAGCGCCAAGCGGTTCTCGATGAGGAAAACGCTGCAAAACGGGGATCGAGTTCAGAGCTAGGTGACGAGG
CGCAGAGCACCGAGTCCCTGAGTACAGAGTCGCAAGCTGATGGAGAGCAAGATGCAAAATCGCCGCCATCAACTGCTGAA
TAA

Upstream 100 bases:

>100_bases
ATCCGGATCAGCGAAGTGGAAATCGCCCAAAAAGAAATTCTGTCAATTGCGCGTCGATTAAGTGACAGCGGTGAAATCAT
GTTAGGCGGCGGTGGCGGCG

Downstream 100 bases:

>100_bases
ATTGAATCATTGCATCGATAAAGTCCCGCCGTTTCGAGCCGTCGCCAGTGGTCAACTGGTGCGTGTGGTAGGTTTAACCT
TAGAGGCGAGTGGTTGCCGT

Product: flagellar assembly protein H

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MSSSNRSDNSDNKLSHRVVSDSEIEFSHWQLPDVTQTEEVSISNLFGYSPQQAPKAVAAETIAPPTMAEIEDIRAQAEEE
GFNEGKTQGYAEGLEQGRLEGLEQGHTEGLAQGHEQGLEAGLAEAKALVSRFEGLLSQFEKPLQLLDGDIEHSLMTLTMA
LAKSVIGHELKTHPEQILSALRLGVESLPIKEQSVSIRMHPDDVALVEQLYSSTQLNRNQWQLEADPSLNSGDCIISSQR
SLVDLTLSSRIDAVFESLRNQQSHLSHQQQQRQAVLDEENAAKRGSSSELGDEAQSTESLSTESQADGEQDAKSPPSTAE

Sequences:

>Translated_320_residues
MSSSNRSDNSDNKLSHRVVSDSEIEFSHWQLPDVTQTEEVSISNLFGYSPQQAPKAVAAETIAPPTMAEIEDIRAQAEEE
GFNEGKTQGYAEGLEQGRLEGLEQGHTEGLAQGHEQGLEAGLAEAKALVSRFEGLLSQFEKPLQLLDGDIEHSLMTLTMA
LAKSVIGHELKTHPEQILSALRLGVESLPIKEQSVSIRMHPDDVALVEQLYSSTQLNRNQWQLEADPSLNSGDCIISSQR
SLVDLTLSSRIDAVFESLRNQQSHLSHQQQQRQAVLDEENAAKRGSSSELGDEAQSTESLSTESQADGEQDAKSPPSTAE
>Mature_319_residues
SSSNRSDNSDNKLSHRVVSDSEIEFSHWQLPDVTQTEEVSISNLFGYSPQQAPKAVAAETIAPPTMAEIEDIRAQAEEEG
FNEGKTQGYAEGLEQGRLEGLEQGHTEGLAQGHEQGLEAGLAEAKALVSRFEGLLSQFEKPLQLLDGDIEHSLMTLTMAL
AKSVIGHELKTHPEQILSALRLGVESLPIKEQSVSIRMHPDDVALVEQLYSSTQLNRNQWQLEADPSLNSGDCIISSQRS
LVDLTLSSRIDAVFESLRNQQSHLSHQQQQRQAVLDEENAAKRGSSSELGDEAQSTESLSTESQADGEQDAKSPPSTAE

Specific function: Needed for flagellar regrowth and assembly [H]

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliH family [H]

Homologues:

Organism=Escherichia coli, GI87082004, Length=163, Percent_Identity=31.9018404907975, Blast_Score=91, Evalue=8e-20,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000563
- InterPro:   IPR018035 [H]

Pfam domain/function: PF02108 FliH [H]

EC number: NA

Molecular weight: Translated: 34941; Mature: 34809

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSNRSDNSDNKLSHRVVSDSEIEFSHWQLPDVTQTEEVSISNLFGYSPQQAPKAVAAE
CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHH
TIAPPTMAEIEDIRAQAEEEGFNEGKTQGYAEGLEQGRLEGLEQGHTEGLAQGHEQGLEA
HCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLAEAKALVSRFEGLLSQFEKPLQLLDGDIEHSLMTLTMALAKSVIGHELKTHPEQILSA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LRLGVESLPIKEQSVSIRMHPDDVALVEQLYSSTQLNRNQWQLEADPSLNSGDCIISSQR
HHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCC
SLVDLTLSSRIDAVFESLRNQQSHLSHQQQQRQAVLDEENAAKRGSSSELGDEAQSTESL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHH
STESQADGEQDAKSPPSTAE
CCHHHCCCCHHCCCCCCCCC
>Mature Secondary Structure 
SSSNRSDNSDNKLSHRVVSDSEIEFSHWQLPDVTQTEEVSISNLFGYSPQQAPKAVAAE
CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHH
TIAPPTMAEIEDIRAQAEEEGFNEGKTQGYAEGLEQGRLEGLEQGHTEGLAQGHEQGLEA
HCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLAEAKALVSRFEGLLSQFEKPLQLLDGDIEHSLMTLTMALAKSVIGHELKTHPEQILSA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
LRLGVESLPIKEQSVSIRMHPDDVALVEQLYSSTQLNRNQWQLEADPSLNSGDCIISSQR
HHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEECCC
SLVDLTLSSRIDAVFESLRNQQSHLSHQQQQRQAVLDEENAAKRGSSSELGDEAQSTESL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCHHHHHHHH
STESQADGEQDAKSPPSTAE
CCHHHCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503; 8224881 [H]