Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919556
Identifier: 117919556
GI number: 117919556
Start: 1301245
End: 1301478
Strand: Reverse
Name: 117919556
Synonym: Shewana3_1107
Alternate gene names: NA
Gene position: 1301478-1301245 (Counterclockwise)
Preceding gene: 117919557
Following gene: 117919554
Centisome position: 26.18
GC content: 47.86
Gene sequence:
>234_bases ATGAAAAAACTCGTTTACCAAGGATTTATCTTAACCAATAGCGAAGGTCGCACCGATACCTGGAAACTCACCATAGGCCA GCAAAGCCGTATTGGTTCTCTGTTTGAACTGCGCCGTTTAGTCAATTACTACCTTGAGCTGGGGATTGTGCCCGCCACCC GCGCTAGCCTACAAGAGGCGAAACAGACCCAAAACTCCATGAGTAAAAATCCGCTAAAACCCCGCAAACGCTAA
Upstream 100 bases:
>100_bases ACGCCTGTGAGGCTCTGAACTGATTAGATATTTAATGTGATTGGTATTAGCCAAGGGATAACACTGCGAGGGATAGGATT TAGCCGAGCATCCATTCAAT
Downstream 100 bases:
>100_bases CGAGCTTAAATCATCGAAAACAGCTCGGGCGCCTTAGACTGCATAAACTCTATAAATACTTTTACCTTTAGCGGCTGCTG ACTCCGCTGGTGATACAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MKKLVYQGFILTNSEGRTDTWKLTIGQQSRIGSLFELRRLVNYYLELGIVPATRASLQEAKQTQNSMSKNPLKPRKR
Sequences:
>Translated_77_residues MKKLVYQGFILTNSEGRTDTWKLTIGQQSRIGSLFELRRLVNYYLELGIVPATRASLQEAKQTQNSMSKNPLKPRKR >Mature_77_residues MKKLVYQGFILTNSEGRTDTWKLTIGQQSRIGSLFELRRLVNYYLELGIVPATRASLQEAKQTQNSMSKNPLKPRKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8899; Mature: 8899
Theoretical pI: Translated: 11.18; Mature: 11.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLVYQGFILTNSEGRTDTWKLTIGQQSRIGSLFELRRLVNYYLELGIVPATRASLQEA CCCCEEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH KQTQNSMSKNPLKPRKR HHHHHHHCCCCCCCCCC >Mature Secondary Structure MKKLVYQGFILTNSEGRTDTWKLTIGQQSRIGSLFELRRLVNYYLELGIVPATRASLQEA CCCCEEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH KQTQNSMSKNPLKPRKR HHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA