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The map label for this gene is ybgC [C]

Identifier: 117919520

GI number: 117919520

Start: 1257026

End: 1257439

Strand: Reverse

Name: ybgC [C]

Synonym: Shewana3_1071

Alternate gene names: 117919520

Gene position: 1257439-1257026 (Counterclockwise)

Preceding gene: 117919521

Following gene: 117919517

Centisome position: 25.29

GC content: 50.24

Gene sequence:

>414_bases
ATGCCGCAATTTAGCCCAAGTTATTCTTTCCCTGTGCAAATTTACTATGAAGATACCGATTTTTCTGGCGTGGTGTATCA
CCCGAACTTTTTGAAATACTTCGAGCGCGCCCGTGAGCATGTGATTGGCGCCGAGCGCTTACGCGACCTCTGGCAACAGC
AGCAATTGGGTTTTGCGGTGTATCGCAGCGACATGTTGTGCCACGAAGGGGTGGAGTTTGCCGATATCATCGATATCCGC
ACTAAGTTCTACTTTGAGAGTAAATATCGCACCGTCTGGCATCAGGAAATTTGGCGCCCAAATGGTAAAAAACCCGCGGT
CACCGCCACCATTGAAATGGTGTGTATGAATCAGGCGCGCCAACTTGCGCCCATGCCCGCCGACTTAATCGCCCAATTAA
GCCTAGGGATGTAA

Upstream 100 bases:

>100_bases
TCTCAATCCTAACCACCGAATTTACCTGCACCTTGGGTTTTGTTTAGCCCGATAAACCGCTAGACTGCGCTCACTCAACA
TACTTCATATCGAAAACGCC

Downstream 100 bases:

>100_bases
AGCTTAGTCTAAGGATGTGAACCATTAACGCAGAGCATTTCGGGTCTGGGTCTTAGCTGGTTCCAGTTCATTTCAAGCTC
TGCGGCCCGCATCGGCTTGG

Product: thioesterase superfamily protein

Products: NA

Alternate protein names: L-Pal System-Associated Acyl-CoA Thioesterase; 4-Hydroxybenzoyl-CoA Thioesterase; Thioesterase Family Protein; Thioesterase Superfamily; Thioesterase; Short-Chain Acyl-CoA Hydrolase; Pol-Pal System-Associated Acyl-CoA Thioesterase

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MPQFSPSYSFPVQIYYEDTDFSGVVYHPNFLKYFERAREHVIGAERLRDLWQQQQLGFAVYRSDMLCHEGVEFADIIDIR
TKFYFESKYRTVWHQEIWRPNGKKPAVTATIEMVCMNQARQLAPMPADLIAQLSLGM

Sequences:

>Translated_137_residues
MPQFSPSYSFPVQIYYEDTDFSGVVYHPNFLKYFERAREHVIGAERLRDLWQQQQLGFAVYRSDMLCHEGVEFADIIDIR
TKFYFESKYRTVWHQEIWRPNGKKPAVTATIEMVCMNQARQLAPMPADLIAQLSLGM
>Mature_136_residues
PQFSPSYSFPVQIYYEDTDFSGVVYHPNFLKYFERAREHVIGAERLRDLWQQQQLGFAVYRSDMLCHEGVEFADIIDIRT
KFYFESKYRTVWHQEIWRPNGKKPAVTATIEMVCMNQARQLAPMPADLIAQLSLGM

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16148; Mature: 16016

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQFSPSYSFPVQIYYEDTDFSGVVYHPNFLKYFERAREHVIGAERLRDLWQQQQLGFAV
CCCCCCCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHH
YRSDMLCHEGVEFADIIDIRTKFYFESKYRTVWHQEIWRPNGKKPAVTATIEMVCMNQAR
HHHHHHHHCCCCHHHHHHHHHHHEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
QLAPMPADLIAQLSLGM
HCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
PQFSPSYSFPVQIYYEDTDFSGVVYHPNFLKYFERAREHVIGAERLRDLWQQQQLGFAV
CCCCCCCCCCEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHH
YRSDMLCHEGVEFADIIDIRTKFYFESKYRTVWHQEIWRPNGKKPAVTATIEMVCMNQAR
HHHHHHHHCCCCHHHHHHHHHHHEEHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
QLAPMPADLIAQLSLGM
HCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA