Click here to switch to the map view.

The map label for this gene is 117919424

Identifier: 117919424

GI number: 117919424

Start: 1145808

End: 1146689

Strand: Reverse

Name: 117919424

Synonym: Shewana3_0975

Alternate gene names: NA

Gene position: 1146689-1145808 (Counterclockwise)

Preceding gene: 117919425

Following gene: 117919423

Centisome position: 23.06

GC content: 51.7

Gene sequence:

>882_bases
ATGGATAAGCAGAGTCTCACTCACCTCACCCTAGGTTTTGGTTTAGGACTGCGAACCCAACACTTCGATCATGTGCTTAG
GCATCAGCCCGAGGTCGACTGGTTCGAAATACTCTCGGAAAACTTTATGGTCGCGGGCGGAAAACCCCGCTATTACCTGA
GTGAGATTGCCGAGCGTTATCCGCTGGTGATGCACGGCGTATCTTTATCCATAGGCAGTACAGATCCGCTGAATATGGAT
TATCTTAAGGCGCTAAAACAACTCGCGAATGAAGTGCAGCCCCAATGGATTTCGGATCATATTTGCTGGACCTCTATTCA
CGGCATCAATAGCCATGACTTACTGCCCCTACCCTACACCGAAGAAACCGTGAGACACGTGGCCGAGCGCATCGGCATAG
TGCAGGACTTTTTAGGCCGCCGTATTCTGATGGAGAACGTCTCCAGCTATTTGTCCTACCAAGATTCCACCATGAATGAA
TGGCAATTTGTTAACGCGGTAGCCGAGGAGGCCGATTGCCTATTGCTGTTAGATATCAACAACATCTACGTCAGTGCCCG
TAACCATCAGTTTCCCCCTGAGGATTATCTGCTGCAAATCGCACCTAATCGGGTGCAACAATTTCACTTAGCGGGCCACT
CGGATTACGGCGACTATGTTATCGACACCCATGATCACGACGTTTGCCCCAGTGTGTGGGAGCTGTATCGGCGGGCATTA
ACCCGCTTTGGCGGTGTGAGCACTATGATCGAGCGCGATGCCAATATCCCCGAATTTGATGCATTGGAAGCCGAATTGGC
GATTGCCCGTAACATCGCCCGCACCACGTTAGGCGAGTCACATCCTCTGGTCCACAGACCGCGGCAGGAGACGGTGGCAT
GA

Upstream 100 bases:

>100_bases
AGGCGGAAAAGTCGGCGCTTAAGACAAATAGGTGTTTATCGATAAAGAAGCGGTCGGAATGTGGGCCGCTTAAGCCATTC
AGTCAGCATAAGGTTTATAC

Downstream 100 bases:

>100_bases
GTCAACTTCGCGAGATCCAACAGCAATTTATGGATTATCTGCTGGCAAGTGCCGCCCAAACGCCGATACCAGAAACTATA
GAGAAATCCTTTAGCGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MDKQSLTHLTLGFGLGLRTQHFDHVLRHQPEVDWFEILSENFMVAGGKPRYYLSEIAERYPLVMHGVSLSIGSTDPLNMD
YLKALKQLANEVQPQWISDHICWTSIHGINSHDLLPLPYTEETVRHVAERIGIVQDFLGRRILMENVSSYLSYQDSTMNE
WQFVNAVAEEADCLLLLDINNIYVSARNHQFPPEDYLLQIAPNRVQQFHLAGHSDYGDYVIDTHDHDVCPSVWELYRRAL
TRFGGVSTMIERDANIPEFDALEAELAIARNIARTTLGESHPLVHRPRQETVA

Sequences:

>Translated_293_residues
MDKQSLTHLTLGFGLGLRTQHFDHVLRHQPEVDWFEILSENFMVAGGKPRYYLSEIAERYPLVMHGVSLSIGSTDPLNMD
YLKALKQLANEVQPQWISDHICWTSIHGINSHDLLPLPYTEETVRHVAERIGIVQDFLGRRILMENVSSYLSYQDSTMNE
WQFVNAVAEEADCLLLLDINNIYVSARNHQFPPEDYLLQIAPNRVQQFHLAGHSDYGDYVIDTHDHDVCPSVWELYRRAL
TRFGGVSTMIERDANIPEFDALEAELAIARNIARTTLGESHPLVHRPRQETVA
>Mature_293_residues
MDKQSLTHLTLGFGLGLRTQHFDHVLRHQPEVDWFEILSENFMVAGGKPRYYLSEIAERYPLVMHGVSLSIGSTDPLNMD
YLKALKQLANEVQPQWISDHICWTSIHGINSHDLLPLPYTEETVRHVAERIGIVQDFLGRRILMENVSSYLSYQDSTMNE
WQFVNAVAEEADCLLLLDINNIYVSARNHQFPPEDYLLQIAPNRVQQFHLAGHSDYGDYVIDTHDHDVCPSVWELYRRAL
TRFGGVSTMIERDANIPEFDALEAELAIARNIARTTLGESHPLVHRPRQETVA

Specific function: Unknown

COG id: COG3220

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0276 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007801
- InterPro:   IPR013022 [H]

Pfam domain/function: PF05114 DUF692 [H]

EC number: NA

Molecular weight: Translated: 33603; Mature: 33603

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKQSLTHLTLGFGLGLRTQHFDHVLRHQPEVDWFEILSENFMVAGGKPRYYLSEIAERY
CCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHCCEEEECCCCHHHHHHHHHHC
PLVMHGVSLSIGSTDPLNMDYLKALKQLANEVQPQWISDHICWTSIHGINSHDLLPLPYT
CEEEECCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCCCCCCCCCC
EETVRHVAERIGIVQDFLGRRILMENVSSYLSYQDSTMNEWQFVNAVAEEADCLLLLDIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEC
NIYVSARNHQFPPEDYLLQIAPNRVQQFHLAGHSDYGDYVIDTHDHDVCPSVWELYRRAL
CEEEEECCCCCCCHHHEEEECCHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHH
TRFGGVSTMIERDANIPEFDALEAELAIARNIARTTLGESHPLVHRPRQETVA
HHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCC
>Mature Secondary Structure
MDKQSLTHLTLGFGLGLRTQHFDHVLRHQPEVDWFEILSENFMVAGGKPRYYLSEIAERY
CCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHCCEEEECCCCHHHHHHHHHHC
PLVMHGVSLSIGSTDPLNMDYLKALKQLANEVQPQWISDHICWTSIHGINSHDLLPLPYT
CEEEECCEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCCCCCCCCCC
EETVRHVAERIGIVQDFLGRRILMENVSSYLSYQDSTMNEWQFVNAVAEEADCLLLLDIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEEC
NIYVSARNHQFPPEDYLLQIAPNRVQQFHLAGHSDYGDYVIDTHDHDVCPSVWELYRRAL
CEEEEECCCCCCCHHHEEEECCHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHH
TRFGGVSTMIERDANIPEFDALEAELAIARNIARTTLGESHPLVHRPRQETVA
HHHCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA