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The map label for this gene is 117919370

Identifier: 117919370

GI number: 117919370

Start: 1076435

End: 1077283

Strand: Direct

Name: 117919370

Synonym: Shewana3_0921

Alternate gene names: NA

Gene position: 1076435-1077283 (Clockwise)

Preceding gene: 117919369

Following gene: 117919371

Centisome position: 21.65

GC content: 53.59

Gene sequence:

>849_bases
GTGATACGTAGAGCCAAACCCTTACTCGGCACCTTAGTCGAAATTGCCGCTGAGTCCGTTGCCGAGCACAATGCTCATCC
TTCATTTGATGAGCCTGCCCTTCAAGCCGCTATAACAGCGGCTTTTTCGCGTGTGGCCCATATTGGCCGCTTACTCAGTT
TTCACCAGCAGGACAGTGAGCTTAATCTACTGAATCGCCAGCCGGGGCAGTGGATATCCTTAAGCCCTGATAGCCTGAGG
GTGTTGAAGCTCGCCAAGTGGTTTGGCAGGGCTAGTGACAACCTCTTCAACTGCACTGTGGGCGGCGAGATGATGTCCCG
CGGCGCCTTGCCTGCCTATCTCGGGATGCCGCTGCTGTTGCAGGGGGATTGGCGAGATATTGAAATCCAAGCGGATAAAG
CAAGGTTAGCTCGTCCACTGATTTTGACCTTAGATGGCATAGCTAAAGGTTATGCGGTCGATATGGCTGTCACTGAATTG
CGACGGGCCGGCGTGTGCGGTGGCTGGGTGAATGCGGGTGGTGATTTAAAAGTGTTTGGCAGCGCTTCATTAAATGTGTT
GTGCCGTGGTCCGAACGGATTGAGTCAAAAGATCAATGTCAGCAATACCGCCCTTGCCAGTTCGCGGGTTTCCCAGCATT
TAAGCCATGATTATCCCGCGTTATTGTTACCGACGGGCAATTTAGACGAGCAGCAGTGTGCCAGCGACCAAGAAAGGGTT
GTAAGTGTGCGCGCACCGTTTGCCTGGCGCGCCGATGCGTTAACCAAGGTCGCGGGTTACCTTGACGATGCTACCGCCGC
GACAAAAATTCAGCAGTTGGGTGGCGATTTAGTCAACTTCGCGCTCTAA

Upstream 100 bases:

>100_bases
GCAATATTAGCGGTGCCACATTAAGTTGCCGTAATTTACTCGATGGCGTAAAACGGTTACTTGTTATCCATCAACTCTTT
TTGTCGCAGTCAGTCGCATA

Downstream 100 bases:

>100_bases
GGTTTGCGGACAAAGCTTTCATCAATCTTTAGTATTTTTGACGATATAAATAAAAATGAAAAAATTAAGTGGTTATCCCA
ATTGGTTTTTCTGGTTGATC

Product: ApbE family protein

Products: NA

Alternate protein names: ApbE Family Protein; ApbE-Like Lipoprotein; Thiamine Biosynthesis Lipoprotein ApbE Transmembrane; Thiamine Biosynthesis Lipoprotein APBE Transmembrane; Iron-Sulfur Cluster Assembly/Repair Protein ApbE; Abpe Family Protein

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MIRRAKPLLGTLVEIAAESVAEHNAHPSFDEPALQAAITAAFSRVAHIGRLLSFHQQDSELNLLNRQPGQWISLSPDSLR
VLKLAKWFGRASDNLFNCTVGGEMMSRGALPAYLGMPLLLQGDWRDIEIQADKARLARPLILTLDGIAKGYAVDMAVTEL
RRAGVCGGWVNAGGDLKVFGSASLNVLCRGPNGLSQKINVSNTALASSRVSQHLSHDYPALLLPTGNLDEQQCASDQERV
VSVRAPFAWRADALTKVAGYLDDATAATKIQQLGGDLVNFAL

Sequences:

>Translated_282_residues
MIRRAKPLLGTLVEIAAESVAEHNAHPSFDEPALQAAITAAFSRVAHIGRLLSFHQQDSELNLLNRQPGQWISLSPDSLR
VLKLAKWFGRASDNLFNCTVGGEMMSRGALPAYLGMPLLLQGDWRDIEIQADKARLARPLILTLDGIAKGYAVDMAVTEL
RRAGVCGGWVNAGGDLKVFGSASLNVLCRGPNGLSQKINVSNTALASSRVSQHLSHDYPALLLPTGNLDEQQCASDQERV
VSVRAPFAWRADALTKVAGYLDDATAATKIQQLGGDLVNFAL
>Mature_282_residues
MIRRAKPLLGTLVEIAAESVAEHNAHPSFDEPALQAAITAAFSRVAHIGRLLSFHQQDSELNLLNRQPGQWISLSPDSLR
VLKLAKWFGRASDNLFNCTVGGEMMSRGALPAYLGMPLLLQGDWRDIEIQADKARLARPLILTLDGIAKGYAVDMAVTEL
RRAGVCGGWVNAGGDLKVFGSASLNVLCRGPNGLSQKINVSNTALASSRVSQHLSHDYPALLLPTGNLDEQQCASDQERV
VSVRAPFAWRADALTKVAGYLDDATAATKIQQLGGDLVNFAL

Specific function: Unknown

COG id: COG1477

COG function: function code H; Membrane-associated lipoprotein involved in thiamine biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30349; Mature: 30349

Theoretical pI: Translated: 7.55; Mature: 7.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRAKPLLGTLVEIAAESVAEHNAHPSFDEPALQAAITAAFSRVAHIGRLLSFHQQDSE
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LNLLNRQPGQWISLSPDSLRVLKLAKWFGRASDNLFNCTVGGEMMSRGALPAYLGMPLLL
HHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHCCCCHHHHCCCEEE
QGDWRDIEIQADKARLARPLILTLDGIAKGYAVDMAVTELRRAGVCGGWVNAGGDLKVFG
ECCCCEEEEEECHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
SASLNVLCRGPNGLSQKINVSNTALASSRVSQHLSHDYPALLLPTGNLDEQQCASDQERV
CCCEEEEEECCCCCCCEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCHHHE
VSVRAPFAWRADALTKVAGYLDDATAATKIQQLGGDLVNFAL
EEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCC
>Mature Secondary Structure
MIRRAKPLLGTLVEIAAESVAEHNAHPSFDEPALQAAITAAFSRVAHIGRLLSFHQQDSE
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LNLLNRQPGQWISLSPDSLRVLKLAKWFGRASDNLFNCTVGGEMMSRGALPAYLGMPLLL
HHHHCCCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEECHHHHHCCCCHHHHCCCEEE
QGDWRDIEIQADKARLARPLILTLDGIAKGYAVDMAVTELRRAGVCGGWVNAGGDLKVFG
ECCCCEEEEEECHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEE
SASLNVLCRGPNGLSQKINVSNTALASSRVSQHLSHDYPALLLPTGNLDEQQCASDQERV
CCCEEEEEECCCCCCCEECCCHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHCCCHHHE
VSVRAPFAWRADALTKVAGYLDDATAATKIQQLGGDLVNFAL
EEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA