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The map label for this gene is ywbG [H]

Identifier: 117919338

GI number: 117919338

Start: 1031546

End: 1032280

Strand: Direct

Name: ywbG [H]

Synonym: Shewana3_0886

Alternate gene names: 117919338

Gene position: 1031546-1032280 (Clockwise)

Preceding gene: 117919337

Following gene: 117919339

Centisome position: 20.75

GC content: 51.43

Gene sequence:

>735_bases
ATGTCGAGCCTTAACTTAAGCCCTGCAGCGATTTCTGAATTACTGTTTTCGCAGACGGGATTGGCACTTATCAGCTTGTT
ATTAACGCTATTCTGTTACTTTGCGGCCAAGCGTTTATATAGGCTCCACCGTGTGTGGTGGTTGGCGCCGATTGTACTTG
CGCCCGTGGTGATTACGCTCTTGGTGTTTAATCTCGATATTCCACTGCCGACTTATTTTGAATACACCCATTGGTTAATG
GCGATGTTAGCACCAGCGACGATTGCATTTGCCTTGCCGATTTATCGGGAGCGTAAACTCATTCGCCAATATCCGCTGAC
CATTGCCCTTGGGGTGATAGCGGGATTGTTGCTGGGCATGATTTCTAGCTGGCTGTTAGTGAAATTTGTGCCACTGCCGG
TCGAGCTGTCTAAGAGCTTGTTGGTGCGTTCGGTATCTACGCCCTTTGCGATGGAAGCGACAAGCGCCTTTGGCGGAGTG
CCAGAACTGACCGCCATGATGGTGCTCATCACCGGCATTATCGGCATGTTGGTATGTGAGCCGCTGTTCAAGCTGATGCA
CATTCGTACGTCTTTAGGTAAGGGCGTGGCATTGGGCGCTTCGGCCCACGGTGCGGGCGCCGCAAAAGCCAGTGAGTTAG
GCCAGCAAGAGGGCGTTATTGCCAGTTTGACCATGATTTTTATCGGGATTGCTATGGTGCTGGGCGCGCCCGTATTTGCT
GTGATCTTCAGTTAG

Upstream 100 bases:

>100_bases
GCGTGATGGTGGGCACGGGATTTGTGGTTGACCGAGTATTTCGATTCGAGCGTCAACTCAATATCAAAAAGCATGCGCGT
CGCCATGCTAAGGCCGCCTA

Downstream 100 bases:

>100_bases
TGTTCGAGAGTGATGTGCTGAATTTGCGTTAACCCTCTCCACCTTAATGTGATTTTGTTAGTTTAAATGATGTTGTTTTG
CCTCTTAGGGCGCTAACCTC

Product: LrgB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 243

Protein sequence:

>244_residues
MSSLNLSPAAISELLFSQTGLALISLLLTLFCYFAAKRLYRLHRVWWLAPIVLAPVVITLLVFNLDIPLPTYFEYTHWLM
AMLAPATIAFALPIYRERKLIRQYPLTIALGVIAGLLLGMISSWLLVKFVPLPVELSKSLLVRSVSTPFAMEATSAFGGV
PELTAMMVLITGIIGMLVCEPLFKLMHIRTSLGKGVALGASAHGAGAAKASELGQQEGVIASLTMIFIGIAMVLGAPVFA
VIFS

Sequences:

>Translated_244_residues
MSSLNLSPAAISELLFSQTGLALISLLLTLFCYFAAKRLYRLHRVWWLAPIVLAPVVITLLVFNLDIPLPTYFEYTHWLM
AMLAPATIAFALPIYRERKLIRQYPLTIALGVIAGLLLGMISSWLLVKFVPLPVELSKSLLVRSVSTPFAMEATSAFGGV
PELTAMMVLITGIIGMLVCEPLFKLMHIRTSLGKGVALGASAHGAGAAKASELGQQEGVIASLTMIFIGIAMVLGAPVFA
VIFS
>Mature_243_residues
SSLNLSPAAISELLFSQTGLALISLLLTLFCYFAAKRLYRLHRVWWLAPIVLAPVVITLLVFNLDIPLPTYFEYTHWLMA
MLAPATIAFALPIYRERKLIRQYPLTIALGVIAGLLLGMISSWLLVKFVPLPVELSKSLLVRSVSTPFAMEATSAFGGVP
ELTAMMVLITGIIGMLVCEPLFKLMHIRTSLGKGVALGASAHGAGAAKASELGQQEGVIASLTMIFIGIAMVLGAPVFAV
IFS

Specific function: Unknown

COG id: COG1346

COG function: function code M; Putative effector of murein hydrolase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yohK (E.coli)/ywbG (IPA-22R) (B.subtilis) family [H]

Homologues:

Organism=Escherichia coli, GI1788464, Length=213, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005261
- InterPro:   IPR007300 [H]

Pfam domain/function: PF04172 LrgB [H]

EC number: NA

Molecular weight: Translated: 26303; Mature: 26172

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLNLSPAAISELLFSQTGLALISLLLTLFCYFAAKRLYRLHRVWWLAPIVLAPVVITL
CCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVFNLDIPLPTYFEYTHWLMAMLAPATIAFALPIYRERKLIRQYPLTIALGVIAGLLLGM
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISSWLLVKFVPLPVELSKSLLVRSVSTPFAMEATSAFGGVPELTAMMVLITGIIGMLVCE
HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
PLFKLMHIRTSLGKGVALGASAHGAGAAKASELGQQEGVIASLTMIFIGIAMVLGAPVFA
HHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHH
VIFS
HHCC
>Mature Secondary Structure 
SSLNLSPAAISELLFSQTGLALISLLLTLFCYFAAKRLYRLHRVWWLAPIVLAPVVITL
CCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LVFNLDIPLPTYFEYTHWLMAMLAPATIAFALPIYRERKLIRQYPLTIALGVIAGLLLGM
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISSWLLVKFVPLPVELSKSLLVRSVSTPFAMEATSAFGGVPELTAMMVLITGIIGMLVCE
HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
PLFKLMHIRTSLGKGVALGASAHGAGAAKASELGQQEGVIASLTMIFIGIAMVLGAPVFA
HHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHH
VIFS
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]