Click here to switch to the map view.

The map label for this gene is 117919325

Identifier: 117919325

GI number: 117919325

Start: 1018421

End: 1019428

Strand: Direct

Name: 117919325

Synonym: Shewana3_0873

Alternate gene names: NA

Gene position: 1018421-1019428 (Clockwise)

Preceding gene: 117919324

Following gene: 117919329

Centisome position: 20.48

GC content: 49.5

Gene sequence:

>1008_bases
ATGAATATTCAAAAAAGTGCTCTAGCGATAGCGTTGACGGGTTTACTGTTTGGTTGCGGCGGCTCTGATTCGGGCGAGCC
CGCCACTCAAATGGCGACCTTTAGCCTAGGGGTTTCAGATAACCCCGCCGATGCAAAATCGGTCACTATCGCATTTAGGC
AGGTCGTGCTGAAGAACGACACGGGTAGCTACTCATTTAATGTCACTCCAAATGGCGAGCTCAAATTTGTCGATCTATTA
GAGTTTCAAGGCAGCGCGGTAGAAACGCTGGTGAGTGGTCAATCCATTCCTGTCGGTGAATACCAAATGTGCCTGTATAT
GAAAAACAGCACAGTAGCCAATAGCGAAAGCTCACACGTACAAACCTTCGATGACACTCTTTATGGGCTAACGACCAACA
GCAATGGCTCATGCGGTGGTATGGGCGCCGATGAAAGTGACACTGGCCGATTGTTTTTTAATAAAAAATTCACCATTGCG
GCGGGTGTAAACAGCTTTGTCGCCGAGTTTGATTTAAGCAAAGGTCTGCAAGATCCCCATGGCAACAAGGACTACTGGAC
GCTGAAACCGACTTCAGTGCAATTATTTAATCAGTCCGAAGTGGGTGCGATTAAAGGCACAGTGGGCGCGACAGTGATGG
AAGGCTGTGAAGTCGCCGCAGGTGGCTCTGAGTTCTCGCCAGCGGTTTATTTGTATCCCGCCAATACCACGCTTGAGCAG
ATGAAAGATTTCAGAACCGAAGCTGACACGGCGACTGAAATCGCACCTATCGCCGCCGCTCGGGTGAATGATGTCACAGA
CACAAACGGCCAAGTCGTCGGCCACGATTATGAATTTGGTTTTGTGGTCGCGGGTGATTACAGCTTAGGCTATACCTGCT
TAGCGCAAAATGATGATCCGGATGTGAGTAACAATCCCGATGATGTGGAAGCGCCTTTCTTTATCCATGCCGCAGAAACT
GGGGTGACAGTTACCGCTAATGGCGTTGCTGAGCGTAACTTTCCGTAG

Upstream 100 bases:

>100_bases
CCGTTTGAGCCGATGTTTTCATGCTTTGGCTTTACTGAATTGTGCTCAAAGATTGAGGTAGGCGATGCTGAGAATTTTTT
GGAACAAATGAAGGTATCCT

Downstream 100 bases:

>100_bases
GCCTAATGTCCCATACGTAACTTCCCGTAGGAGTCACGTCCCGTAGAGTTAGTTCGCGAATAAAACACAATAAAAAAACC
AGCAGAAATGCTGGTTTTTT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MNIQKSALAIALTGLLFGCGGSDSGEPATQMATFSLGVSDNPADAKSVTIAFRQVVLKNDTGSYSFNVTPNGELKFVDLL
EFQGSAVETLVSGQSIPVGEYQMCLYMKNSTVANSESSHVQTFDDTLYGLTTNSNGSCGGMGADESDTGRLFFNKKFTIA
AGVNSFVAEFDLSKGLQDPHGNKDYWTLKPTSVQLFNQSEVGAIKGTVGATVMEGCEVAAGGSEFSPAVYLYPANTTLEQ
MKDFRTEADTATEIAPIAAARVNDVTDTNGQVVGHDYEFGFVVAGDYSLGYTCLAQNDDPDVSNNPDDVEAPFFIHAAET
GVTVTANGVAERNFP

Sequences:

>Translated_335_residues
MNIQKSALAIALTGLLFGCGGSDSGEPATQMATFSLGVSDNPADAKSVTIAFRQVVLKNDTGSYSFNVTPNGELKFVDLL
EFQGSAVETLVSGQSIPVGEYQMCLYMKNSTVANSESSHVQTFDDTLYGLTTNSNGSCGGMGADESDTGRLFFNKKFTIA
AGVNSFVAEFDLSKGLQDPHGNKDYWTLKPTSVQLFNQSEVGAIKGTVGATVMEGCEVAAGGSEFSPAVYLYPANTTLEQ
MKDFRTEADTATEIAPIAAARVNDVTDTNGQVVGHDYEFGFVVAGDYSLGYTCLAQNDDPDVSNNPDDVEAPFFIHAAET
GVTVTANGVAERNFP
>Mature_335_residues
MNIQKSALAIALTGLLFGCGGSDSGEPATQMATFSLGVSDNPADAKSVTIAFRQVVLKNDTGSYSFNVTPNGELKFVDLL
EFQGSAVETLVSGQSIPVGEYQMCLYMKNSTVANSESSHVQTFDDTLYGLTTNSNGSCGGMGADESDTGRLFFNKKFTIA
AGVNSFVAEFDLSKGLQDPHGNKDYWTLKPTSVQLFNQSEVGAIKGTVGATVMEGCEVAAGGSEFSPAVYLYPANTTLEQ
MKDFRTEADTATEIAPIAAARVNDVTDTNGQVVGHDYEFGFVVAGDYSLGYTCLAQNDDPDVSNNPDDVEAPFFIHAAET
GVTVTANGVAERNFP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35412; Mature: 35412

Theoretical pI: Translated: 4.00; Mature: 4.00

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIQKSALAIALTGLLFGCGGSDSGEPATQMATFSLGVSDNPADAKSVTIAFRQVVLKND
CCCCHHHHHHEEEEHHEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHEEEEEEEEECC
TGSYSFNVTPNGELKFVDLLEFQGSAVETLVSGQSIPVGEYQMCLYMKNSTVANSESSHV
CCCEEEEECCCCCEEEEEEEECCCCHHHHHHCCCCCCCCCEEEEEEEECCEECCCCCCCE
QTFDDTLYGLTTNSNGSCGGMGADESDTGRLFFNKKFTIAAGVNSFVAEFDLSKGLQDPH
EEECCEEEEEEECCCCCCCCCCCCCCCCCEEEEECEEEEEECCHHHHHHHHHHCCCCCCC
GNKDYWTLKPTSVQLFNQSEVGAIKGTVGATVMEGCEVAAGGSEFSPAVYLYPANTTLEQ
CCCCEEEECCCEEEEECCCCCCEEECCCCHHHHCCCEEECCCCCCCCEEEEEECCCHHHH
MKDFRTEADTATEIAPIAAARVNDVTDTNGQVVGHDYEFGFVVAGDYSLGYTCLAQNDDP
HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEECCCCCEEEEECCCCC
DVSNNPDDVEAPFFIHAAETGVTVTANGVAERNFP
CCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCC
>Mature Secondary Structure
MNIQKSALAIALTGLLFGCGGSDSGEPATQMATFSLGVSDNPADAKSVTIAFRQVVLKND
CCCCHHHHHHEEEEHHEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHEEEEEEEEECC
TGSYSFNVTPNGELKFVDLLEFQGSAVETLVSGQSIPVGEYQMCLYMKNSTVANSESSHV
CCCEEEEECCCCCEEEEEEEECCCCHHHHHHCCCCCCCCCEEEEEEEECCEECCCCCCCE
QTFDDTLYGLTTNSNGSCGGMGADESDTGRLFFNKKFTIAAGVNSFVAEFDLSKGLQDPH
EEECCEEEEEEECCCCCCCCCCCCCCCCCEEEEECEEEEEECCHHHHHHHHHHCCCCCCC
GNKDYWTLKPTSVQLFNQSEVGAIKGTVGATVMEGCEVAAGGSEFSPAVYLYPANTTLEQ
CCCCEEEECCCEEEEECCCCCCEEECCCCHHHHCCCEEECCCCCCCCEEEEEECCCHHHH
MKDFRTEADTATEIAPIAAARVNDVTDTNGQVVGHDYEFGFVVAGDYSLGYTCLAQNDDP
HHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEEEECCCCCEEEEECCCCC
DVSNNPDDVEAPFFIHAAETGVTVTANGVAERNFP
CCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA