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The map label for this gene is hemG [H]

Identifier: 117919323

GI number: 117919323

Start: 1017066

End: 1017587

Strand: Direct

Name: hemG [H]

Synonym: Shewana3_0871

Alternate gene names: 117919323

Gene position: 1017066-1017587 (Clockwise)

Preceding gene: 117919318

Following gene: 117919324

Centisome position: 20.46

GC content: 43.87

Gene sequence:

>522_bases
GTGAAAAAAATTCTGATCATCTTCTCTAGTGTTCATGGTCAAACTCGTAAAATCACCAATCAATTGGCGCAGCAACTCAA
AGAGTTAGGCAACTCAGTGGTGATTGCGGATATTAAGGCCGTCCCTGCGATGGAATCCTTCGATAAGATCATTATTGGCG
CCAGCATTCGCCATGGGAAACATAACCCCGCGCTGTACGAGTTTATTCAGAAGCATCAACAGATCCTCACACAAAAGGTG
AGTGGCTTTTTCTCCGTCAGTTTAGTCGCCCGTAAGCCAGAGAAAAATACCCCTGAAACCAATCCCTATATGCAGGCGTT
TTTAAGTAAAACGACGTGGCGCCCTAAGCTGTTACAGGTATTTGGCGGTAACTTAAATTACCAAGGCTATAACGCGTTAG
ATAGAAATATCATCCGCTTTATCATGTGGTTAACTAAGGGGCCTACGGATCCTGTCACTAATGTGGAATACACTGACTGG
CAAAAAGTGAATGATTTTGGCCAACAGATCCATCAAGCCTAA

Upstream 100 bases:

>100_bases
GAGGCTGAATCTATTCGTTTGTTTAGGTCAACATAAAGCCGCCGTCTTTGTCTTTTTCTGGCCGCTTTTTCTTATTTTTG
TTGAGATAATCGAGGCTTAA

Downstream 100 bases:

>100_bases
ATGGGCGAATGGGATAAGTCTGCCGCAAAGGTAACCCAACTATGTCAGAAAAATTAACACAGGCACTCGGTTTTTTGTTG
GCACGTTTGCACGTTTGGAT

Product: protoporphyrinogen oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MKKILIIFSSVHGQTRKITNQLAQQLKELGNSVVIADIKAVPAMESFDKIIIGASIRHGKHNPALYEFIQKHQQILTQKV
SGFFSVSLVARKPEKNTPETNPYMQAFLSKTTWRPKLLQVFGGNLNYQGYNALDRNIIRFIMWLTKGPTDPVTNVEYTDW
QKVNDFGQQIHQA

Sequences:

>Translated_173_residues
MKKILIIFSSVHGQTRKITNQLAQQLKELGNSVVIADIKAVPAMESFDKIIIGASIRHGKHNPALYEFIQKHQQILTQKV
SGFFSVSLVARKPEKNTPETNPYMQAFLSKTTWRPKLLQVFGGNLNYQGYNALDRNIIRFIMWLTKGPTDPVTNVEYTDW
QKVNDFGQQIHQA
>Mature_173_residues
MKKILIIFSSVHGQTRKITNQLAQQLKELGNSVVIADIKAVPAMESFDKIIIGASIRHGKHNPALYEFIQKHQQILTQKV
SGFFSVSLVARKPEKNTPETNPYMQAFLSKTTWRPKLLQVFGGNLNYQGYNALDRNIIRFIMWLTKGPTDPVTNVEYTDW
QKVNDFGQQIHQA

Specific function: Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX using menaquinone as electron acceptor [H]

COG id: COG4635

COG function: function code CH; Flavodoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

Organism=Escherichia coli, GI1790285, Length=170, Percent_Identity=45.2941176470588, Blast_Score=159, Evalue=7e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008254
- InterPro:   IPR001226 [H]

Pfam domain/function: PF00258 Flavodoxin_1 [H]

EC number: =1.3.5.3 [H]

Molecular weight: Translated: 19756; Mature: 19756

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: PS50902 FLAVODOXIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILIIFSSVHGQTRKITNQLAQQLKELGNSVVIADIKAVPAMESFDKIIIGASIRHGK
CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECHHCCCHHHHHHEECCCCCCCCC
HNPALYEFIQKHQQILTQKVSGFFSVSLVARKPEKNTPETNPYMQAFLSKTTWRPKLLQV
CCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHH
FGGNLNYQGYNALDRNIIRFIMWLTKGPTDPVTNVEYTDWQKVNDFGQQIHQA
HCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKILIIFSSVHGQTRKITNQLAQQLKELGNSVVIADIKAVPAMESFDKIIIGASIRHGK
CCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEECHHCCCHHHHHHEECCCCCCCCC
HNPALYEFIQKHQQILTQKVSGFFSVSLVARKPEKNTPETNPYMQAFLSKTTWRPKLLQV
CCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHH
FGGNLNYQGYNALDRNIIRFIMWLTKGPTDPVTNVEYTDWQKVNDFGQQIHQA
HCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]