| Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008577 |
| Length | 4,972,204 |
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The map label for this gene is pntB [H]
Identifier: 117919305
GI number: 117919305
Start: 989925
End: 991409
Strand: Reverse
Name: pntB [H]
Synonym: Shewana3_0853
Alternate gene names: 117919305
Gene position: 991409-989925 (Counterclockwise)
Preceding gene: 117919306
Following gene: 117919304
Centisome position: 19.94
GC content: 51.58
Gene sequence:
>1485_bases GTGTCTCAAGGACTGGTAACTGCAGCTTACATTATTGCCGCCGTGCTCTTTATCTTCAGTCTCGCAGGATTGTCGAAGCA AGAAACGGCCAAACACGGCAATTTATTTGGTATCACAGGTATGGCCATTGCCCTACTGGCGACCATTTTTAATCCTGACA CCAGCGGTGTCGCTTGGATTATTGTCGCCATGGTGATTGGTGGTGCCATCGGCGTGCGTTTAGCACTTAAAGTCGAAATG ACGGAAATGCCCGAACTGGTCGCAGTACTCCACAGCTTTGTGGGTATGGCGGCGGTATTAGTGGGCTTTAACAGCTTTAT CGACCTACACCCAGAGCAAGTATCGCAAGTGGTAGTGGCCGTTGGCGGAGATATCAACTCCACCTTAGCCGCAGTGCAGG ATGCGCTAAGCGAAGCGGCCAAAGCCGCCGAGAAAGCCCATTTAACTGGCGCTATGCTCAACATTCACTTAGTGGAAGTG TTCCTCGGGATCTTTATCGGTGCGGTGACCTTCACGGGTTCTATCGTGGCCTTCGGTAAGTTACGCGGATTAATTTCCTC AAAACCTTTGATGTTGCCACATCGCCATAAACTGAACCTCGCAGCGGTATTGGTATCATTGGCGCTATTGGTTTACTTCG TACAAACGGGTGGCACTATGCCCGCCCTACTGTTGATGACACTTATCGCCTTCGCCTTTGGCTGGCATTTAGTGGCCTCA ATCGGCGGTGCGGACATGCCAGTTGTGGTCTCTATGCTGAACTCCTACTCAGGTTGGGCGGCAGCGGCGGCGGGCTTTAT GCTGTCAAACGATCTGCTGATCGTAACAGGTGCGCTCGTGGGTTCATCGGGTGCAATTCTGTCTTACATCATGTGTAAGG CGATGAACCGCTCGTTTATCTCGGTTATCGCAGGTGGATTTGGCACCGATGGTGTGGCCTCATCTGGCGATGAAGAAATG GGCGAATACCGCGAAACCAACGCCGAAGATGTGGCTGACATGCTGAAAAACGCAACTTCTGTCATCATCACCCCAGGCTA TGGTATGGCAGTGGCGCAGGCGCAATATCCTGTGGCTGAAATCACTCAAAAACTGCGTGATCGCGGCGTGAAGGTACGCT TTGGTATTCACCCAGTGGCGGGTCGCTTACCAGGCCATATGAACGTACTCTTGGCTGAAGCCAAAGTGCCCTACGATATC GTGCTCGAAATGGACGAAATCAACGAGGACTTTAGCGATACCGACGTAGTACTCGTCATTGGTGCCAACGATACGGTGAA CCCTGCGGCGATGGAAGATCCGGGCAGCCCAATTGCGGGCATGCCTGTGCTCGAAGTGTGGAAAGCGCAAAACGTGATTG GCTTTAAACGCTCAATGAATACAGGTTATGCGGGTGTACAAAACCCACTGTTCTTTAAAGACAATACTCAAATGCTGTTC GGCGATGCTAAGGCCAGCGTTGAGGCGATTTTAAAAGCGCTGTAA
Upstream 100 bases:
>100_bases CGTTTATTGCCGTGCTGATCGCCAGTATTAACATCTTCGGCGGTTTCACCGTCACTCAGCGCATGCTGAAGATGTTCCGT AAAGATTAAGGGGGTATAAC
Downstream 100 bases:
>100_bases TGCTTAAGTTTGCGTATTAACCATAAAGGGAGCCACTTGGCTCCCTTTATCTTTTCCCCTGCTTAGGGATGTGTTTTCAC ACGTTTTTAAGCCAGCTCAG
Product: pyridine nucleotide transhydrogenase
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit beta; Pyridine nucleotide transhydrogenase subunit beta [H]
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MSQGLVTAAYIIAAVLFIFSLAGLSKQETAKHGNLFGITGMAIALLATIFNPDTSGVAWIIVAMVIGGAIGVRLALKVEM TEMPELVAVLHSFVGMAAVLVGFNSFIDLHPEQVSQVVVAVGGDINSTLAAVQDALSEAAKAAEKAHLTGAMLNIHLVEV FLGIFIGAVTFTGSIVAFGKLRGLISSKPLMLPHRHKLNLAAVLVSLALLVYFVQTGGTMPALLLMTLIAFAFGWHLVAS IGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGVASSGDEEM GEYRETNAEDVADMLKNATSVIITPGYGMAVAQAQYPVAEITQKLRDRGVKVRFGIHPVAGRLPGHMNVLLAEAKVPYDI VLEMDEINEDFSDTDVVLVIGANDTVNPAAMEDPGSPIAGMPVLEVWKAQNVIGFKRSMNTGYAGVQNPLFFKDNTQMLF GDAKASVEAILKAL
Sequences:
>Translated_494_residues MSQGLVTAAYIIAAVLFIFSLAGLSKQETAKHGNLFGITGMAIALLATIFNPDTSGVAWIIVAMVIGGAIGVRLALKVEM TEMPELVAVLHSFVGMAAVLVGFNSFIDLHPEQVSQVVVAVGGDINSTLAAVQDALSEAAKAAEKAHLTGAMLNIHLVEV FLGIFIGAVTFTGSIVAFGKLRGLISSKPLMLPHRHKLNLAAVLVSLALLVYFVQTGGTMPALLLMTLIAFAFGWHLVAS IGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGVASSGDEEM GEYRETNAEDVADMLKNATSVIITPGYGMAVAQAQYPVAEITQKLRDRGVKVRFGIHPVAGRLPGHMNVLLAEAKVPYDI VLEMDEINEDFSDTDVVLVIGANDTVNPAAMEDPGSPIAGMPVLEVWKAQNVIGFKRSMNTGYAGVQNPLFFKDNTQMLF GDAKASVEAILKAL >Mature_493_residues SQGLVTAAYIIAAVLFIFSLAGLSKQETAKHGNLFGITGMAIALLATIFNPDTSGVAWIIVAMVIGGAIGVRLALKVEMT EMPELVAVLHSFVGMAAVLVGFNSFIDLHPEQVSQVVVAVGGDINSTLAAVQDALSEAAKAAEKAHLTGAMLNIHLVEVF LGIFIGAVTFTGSIVAFGKLRGLISSKPLMLPHRHKLNLAAVLVSLALLVYFVQTGGTMPALLLMTLIAFAFGWHLVASI GGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFISVIAGGFGTDGVASSGDEEMG EYRETNAEDVADMLKNATSVIITPGYGMAVAQAQYPVAEITQKLRDRGVKVRFGIHPVAGRLPGHMNVLLAEAKVPYDIV LEMDEINEDFSDTDVVLVIGANDTVNPAAMEDPGSPIAGMPVLEVWKAQNVIGFKRSMNTGYAGVQNPLFFKDNTQMLFG DAKASVEAILKAL
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG1282
COG function: function code C; NAD/NADP transhydrogenase beta subunit
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PNT beta subunit family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=489, Percent_Identity=48.8752556237219, Blast_Score=449, Evalue=1e-126, Organism=Homo sapiens, GI122939153, Length=489, Percent_Identity=48.8752556237219, Blast_Score=449, Evalue=1e-126, Organism=Escherichia coli, GI1787886, Length=497, Percent_Identity=76.056338028169, Blast_Score=741, Evalue=0.0, Organism=Caenorhabditis elegans, GI17550456, Length=490, Percent_Identity=47.9591836734694, Blast_Score=421, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012136 - InterPro: IPR004003 [H]
Pfam domain/function: PF02233 PNTB [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 51832; Mature: 51701
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQGLVTAAYIIAAVLFIFSLAGLSKQETAKHGNLFGITGMAIALLATIFNPDTSGVAWI CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCCHHHH IVAMVIGGAIGVRLALKVEMTEMPELVAVLHSFVGMAAVLVGFNSFIDLHPEQVSQVVVA HHHHHHCCHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEHHH VGGDINSTLAAVQDALSEAAKAAEKAHLTGAMLNIHLVEVFLGIFIGAVTFTGSIVAFGK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH LRGLISSKPLMLPHRHKLNLAAVLVSLALLVYFVQTGGTMPALLLMTLIAFAFGWHLVAS HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFI CCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEHHHCCCCHHHHHHHHHHHCHHHH SVIAGGFGTDGVASSGDEEMGEYRETNAEDVADMLKNATSVIITPGYGMAVAQAQYPVAE HHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHCCCCHHH ITQKLRDRGVKVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINEDFSDTDVVLVI HHHHHHHCCCEEEECCCHHCCCCCCCCEEEEECCCCCEEEEEEHHHCCCCCCCCCEEEEE GANDTVNPAAMEDPGSPIAGMPVLEVWKAQNVIGFKRSMNTGYAGVQNPLFFKDNTQMLF CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEECCCEEEE GDAKASVEAILKAL CCHHHHHHHHHHHC >Mature Secondary Structure SQGLVTAAYIIAAVLFIFSLAGLSKQETAKHGNLFGITGMAIALLATIFNPDTSGVAWI CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEHHHHHHHHHHHHCCCCCCCHHHH IVAMVIGGAIGVRLALKVEMTEMPELVAVLHSFVGMAAVLVGFNSFIDLHPEQVSQVVVA HHHHHHCCHHHEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEHHH VGGDINSTLAAVQDALSEAAKAAEKAHLTGAMLNIHLVEVFLGIFIGAVTFTGSIVAFGK CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH LRGLISSKPLMLPHRHKLNLAAVLVSLALLVYFVQTGGTMPALLLMTLIAFAFGWHLVAS HHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH IGGADMPVVVSMLNSYSGWAAAAAGFMLSNDLLIVTGALVGSSGAILSYIMCKAMNRSFI CCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEHHHCCCCHHHHHHHHHHHCHHHH SVIAGGFGTDGVASSGDEEMGEYRETNAEDVADMLKNATSVIITPGYGMAVAQAQYPVAE HHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCCCHHHCCCCHHH ITQKLRDRGVKVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINEDFSDTDVVLVI HHHHHHHCCCEEEECCCHHCCCCCCCCEEEEECCCCCEEEEEEHHHCCCCCCCCCEEEEE GANDTVNPAAMEDPGSPIAGMPVLEVWKAQNVIGFKRSMNTGYAGVQNPLFFKDNTQMLF CCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEECCCEEEE GDAKASVEAILKAL CCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]