Click here to switch to the map view.

The map label for this gene is 117919303

Identifier: 117919303

GI number: 117919303

Start: 988815

End: 989294

Strand: Direct

Name: 117919303

Synonym: Shewana3_0851

Alternate gene names: NA

Gene position: 988815-989294 (Clockwise)

Preceding gene: 117919302

Following gene: 117919307

Centisome position: 19.89

GC content: 45.21

Gene sequence:

>480_bases
ATGGCTAAGCGCTCGCGAGTACAGACTGAGCAGACCATAAATCAGATTATGGATGAAGCGTTAAGACAAATTTTGACTAT
TGGCTTTGAGACTATGTCTTATACCACGTTATCTGAAGCAACGGGGATTAGCCGCACCGGTATTAGTCATCACTTTCCGC
GTAAAAACGACTTCTTAATCCGTTTAGATAGTCGTATTGGCAATTTATTTGTTGCCGCGCTCGACTTTTCTAGCCAAGAA
GCCTTAGAAGCCTCTTGGATGAAAGCGATGCAAGAAGAGCATTACCGCGCAGTGTTAAGATTATTCTTCAGCCTCTGTGG
TGGCGCGAATAATGAAATCACCCTCTTCAGAGCGGTCAGCACAGCACGTCAGCAAGCCATTGCTGAATTAGGATTGGTCG
GTGATCGCACCATCAATCATCTATTAGGCCGTACTGCGGTTATGCTGCTGTCTAATTTTGATGTTGCCAAAGCGGCATAA

Upstream 100 bases:

>100_bases
CAAAAGCGAAATACACTTGTTTGGCGTTTCCAAACAGCAGTAATCCCTGAAAGGCTTTGGTAAGCTCTACCCCAGAAAAA
GAACAACGGGAGACTTTACT

Downstream 100 bases:

>100_bases
TCATAAGCATCACCACAAAAAGGAGCCTCAGGCTCCTTTTTTGTTTCTATGGTTTGGCGCGCCGATTACGTTTTCGCACT
GTTAAGTTAGTTAAGCTGCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LuxT; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; LuxT Transcriptional Regulator; LuxT Regulator; Regulatory Protein TetR

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MAKRSRVQTEQTINQIMDEALRQILTIGFETMSYTTLSEATGISRTGISHHFPRKNDFLIRLDSRIGNLFVAALDFSSQE
ALEASWMKAMQEEHYRAVLRLFFSLCGGANNEITLFRAVSTARQQAIAELGLVGDRTINHLLGRTAVMLLSNFDVAKAA

Sequences:

>Translated_159_residues
MAKRSRVQTEQTINQIMDEALRQILTIGFETMSYTTLSEATGISRTGISHHFPRKNDFLIRLDSRIGNLFVAALDFSSQE
ALEASWMKAMQEEHYRAVLRLFFSLCGGANNEITLFRAVSTARQQAIAELGLVGDRTINHLLGRTAVMLLSNFDVAKAA
>Mature_158_residues
AKRSRVQTEQTINQIMDEALRQILTIGFETMSYTTLSEATGISRTGISHHFPRKNDFLIRLDSRIGNLFVAALDFSSQEA
LEASWMKAMQEEHYRAVLRLFFSLCGGANNEITLFRAVSTARQQAIAELGLVGDRTINHLLGRTAVMLLSNFDVAKAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17767; Mature: 17635

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRSRVQTEQTINQIMDEALRQILTIGFETMSYTTLSEATGISRTGISHHFPRKNDFLI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
RLDSRIGNLFVAALDFSSQEALEASWMKAMQEEHYRAVLRLFFSLCGGANNEITLFRAVS
EECCHHCCEEHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHH
TARQQAIAELGLVGDRTINHLLGRTAVMLLSNFDVAKAA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHCC
>Mature Secondary Structure 
AKRSRVQTEQTINQIMDEALRQILTIGFETMSYTTLSEATGISRTGISHHFPRKNDFLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEE
RLDSRIGNLFVAALDFSSQEALEASWMKAMQEEHYRAVLRLFFSLCGGANNEITLFRAVS
EECCHHCCEEHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHH
TARQQAIAELGLVGDRTINHLLGRTAVMLLSNFDVAKAA
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA