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The map label for this gene is pqqL [C]

Identifier: 117919294

GI number: 117919294

Start: 975240

End: 976655

Strand: Reverse

Name: pqqL [C]

Synonym: Shewana3_0842

Alternate gene names: 117919294

Gene position: 976655-975240 (Counterclockwise)

Preceding gene: 117919296

Following gene: 117919293

Centisome position: 19.64

GC content: 52.26

Gene sequence:

>1416_bases
ATGAGACCATACCTTAGCGGTTATTTTGGCCTAGTTCTCGCGTTGCTTAGCCCTTCACTTAAGGCGCAGTGCCAGATAAC
GGGCGCCGAGCGACTGTATCAACTCGAATCGCAAATTGAGACTTACACTTTGGCCAATGGCCTCACGGTACACCTCTTGC
CGCAAGCGGATATGCATACCTTGAGCATTGCCAGCCAGTTTAATGTCGGCGCGCGCAATGAGGCCAAGGGCCAAACGGGC
TATGCGCACTTATTCGAGCACATGCTCTTCAAGGGCAGCGAGCAGGCTCCCGGCGACAGCTATGCCCAGCAGTTAAGTGC
TCTTGGGGCGCGTTTTAACGCCAGTACCCACTTCGATTACACCAATTATTACGTCACTCTTCCCAGCCAAGCCCTTAACT
TAGGGCTGTTCCTCGAGGGCGATCGTTTTATTCGCCCCGATTTGAACCAGACTACGGTGAAAAATCAGCAGGAAACCGTG
CTCCAAGAAATGGCGCAAACCATAGATAACCAGCCCTATGTGCGCAGTGCGATGGAGTTTCTGCTAGAGCAGGTTAAGGA
TACGCCCTATGGCCACGGCATTATTGGCAGCCGCGAGGATATTACCGAGGCGAGTCCCGAGCGTTTAACCGCCTTTCACC
GCGACCATTATCGCCCCGATGCGATGCAGTTATCTCTGGTCGGCAAACTACCCTCCGACATCAAGTCGCTTATAGCACAA
CACTTTAATGCTTGGCCCACGCCTAATCAGCCCATAACCGAATTTGATGAACTAAAAATCACGCCTAAGCCCATACATGC
AGAGCTTATTGATGAGCGTGGTCCTTGGCCTGGCTTACTGCTCGCCTGGCATACTGTGGGTAAAAATCATCCCGACGCCG
CCGCTATGCGCCTGCTCGAGGGCTATTTATTCCAAAATACCCGCAGCGCCATAGCGCAAATCAGCCAGCACGACCCGGCG
CAAATGTTGAGTTATTCACTGCCCTTTGAACTGGAAAATCATGGCATAACCAATCTGGTCTTAGTGCCTAGGGCCAAAAC
CTCCCTCGATGACTTAACGGAAAAGGTTTTAGGCGTGGTTGCCAAAGTGCAGCAGACGTCATTGAGTGACGCTGAACTGT
GCCAACTCAAACAAACTTGGCTGAACAATCAGTTAGCGCAGCTCGATAACACTCAATCGCTCGCCACTCTGCTATCCGCC
ACGGCGAAACAAGACCAAATGCATCCTTTAACGGCCCAGTGGCAACGGATTAACTCCGTTAGTGCAGAGGATATTCAACG
GGTTGCCACGCGATACTTTACCACCGATATGGTCAGGGTTGACCTGTTACCGCCTTGGTATATCCGCGTAGGAAAGACAT
TGCTGGAGTGGCTGCCATCGGGTGTGAGCGATAGCCTTGAGGACGCGGTACTATGA

Upstream 100 bases:

>100_bases
TGCTATTCAACTGATTTAGATGAAATCAGACGAGTGGGTTAGCCTGCTTACCAACCACACGGATGAAAGCCTTCAGCGGG
TAATTTAGATAGGATGCTAA

Downstream 100 bases:

>100_bases
TAAAAACGATTCCATTCACTAGATTGGCAATAGTGCAAAATATCCTTAAAGGCCTAAAAGCCATGAGTCTTGGTCTTATC
GGTATCACGCTAATGGCCTG

Product: peptidase M16 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MRPYLSGYFGLVLALLSPSLKAQCQITGAERLYQLESQIETYTLANGLTVHLLPQADMHTLSIASQFNVGARNEAKGQTG
YAHLFEHMLFKGSEQAPGDSYAQQLSALGARFNASTHFDYTNYYVTLPSQALNLGLFLEGDRFIRPDLNQTTVKNQQETV
LQEMAQTIDNQPYVRSAMEFLLEQVKDTPYGHGIIGSREDITEASPERLTAFHRDHYRPDAMQLSLVGKLPSDIKSLIAQ
HFNAWPTPNQPITEFDELKITPKPIHAELIDERGPWPGLLLAWHTVGKNHPDAAAMRLLEGYLFQNTRSAIAQISQHDPA
QMLSYSLPFELENHGITNLVLVPRAKTSLDDLTEKVLGVVAKVQQTSLSDAELCQLKQTWLNNQLAQLDNTQSLATLLSA
TAKQDQMHPLTAQWQRINSVSAEDIQRVATRYFTTDMVRVDLLPPWYIRVGKTLLEWLPSGVSDSLEDAVL

Sequences:

>Translated_471_residues
MRPYLSGYFGLVLALLSPSLKAQCQITGAERLYQLESQIETYTLANGLTVHLLPQADMHTLSIASQFNVGARNEAKGQTG
YAHLFEHMLFKGSEQAPGDSYAQQLSALGARFNASTHFDYTNYYVTLPSQALNLGLFLEGDRFIRPDLNQTTVKNQQETV
LQEMAQTIDNQPYVRSAMEFLLEQVKDTPYGHGIIGSREDITEASPERLTAFHRDHYRPDAMQLSLVGKLPSDIKSLIAQ
HFNAWPTPNQPITEFDELKITPKPIHAELIDERGPWPGLLLAWHTVGKNHPDAAAMRLLEGYLFQNTRSAIAQISQHDPA
QMLSYSLPFELENHGITNLVLVPRAKTSLDDLTEKVLGVVAKVQQTSLSDAELCQLKQTWLNNQLAQLDNTQSLATLLSA
TAKQDQMHPLTAQWQRINSVSAEDIQRVATRYFTTDMVRVDLLPPWYIRVGKTLLEWLPSGVSDSLEDAVL
>Mature_471_residues
MRPYLSGYFGLVLALLSPSLKAQCQITGAERLYQLESQIETYTLANGLTVHLLPQADMHTLSIASQFNVGARNEAKGQTG
YAHLFEHMLFKGSEQAPGDSYAQQLSALGARFNASTHFDYTNYYVTLPSQALNLGLFLEGDRFIRPDLNQTTVKNQQETV
LQEMAQTIDNQPYVRSAMEFLLEQVKDTPYGHGIIGSREDITEASPERLTAFHRDHYRPDAMQLSLVGKLPSDIKSLIAQ
HFNAWPTPNQPITEFDELKITPKPIHAELIDERGPWPGLLLAWHTVGKNHPDAAAMRLLEGYLFQNTRSAIAQISQHDPA
QMLSYSLPFELENHGITNLVLVPRAKTSLDDLTEKVLGVVAKVQQTSLSDAELCQLKQTWLNNQLAQLDNTQSLATLLSA
TAKQDQMHPLTAQWQRINSVSAEDIQRVATRYFTTDMVRVDLLPPWYIRVGKTLLEWLPSGVSDSLEDAVL

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Homo sapiens, GI94538354, Length=419, Percent_Identity=23.8663484486874, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI46593007, Length=435, Percent_Identity=21.3793103448276, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI155969707, Length=226, Percent_Identity=25.6637168141593, Blast_Score=66, Evalue=8e-11,
Organism=Escherichia coli, GI1787770, Length=203, Percent_Identity=27.0935960591133, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17553678, Length=402, Percent_Identity=24.3781094527363, Blast_Score=88, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71999683, Length=230, Percent_Identity=23.9130434782609, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6323192, Length=228, Percent_Identity=24.1228070175439, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21357875, Length=402, Percent_Identity=22.636815920398, Blast_Score=67, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24646943, Length=402, Percent_Identity=22.636815920398, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR011765
- InterPro:   IPR001431
- InterPro:   IPR007863 [H]

Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 52764; Mature: 52764

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPYLSGYFGLVLALLSPSLKAQCQITGAERLYQLESQIETYTLANGLTVHLLPQADMHT
CCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHEECCCCEEEEECCCCCHH
LSIASQFNVGARNEAKGQTGYAHLFEHMLFKGSEQAPGDSYAQQLSALGARFNASTHFDY
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEE
TNYYVTLPSQALNLGLFLEGDRFIRPDLNQTTVKNQQETVLQEMAQTIDNQPYVRSAMEF
CEEEEECCHHHCCEEEEEECCEEECCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH
LLEQVKDTPYGHGIIGSREDITEASPERLTAFHRDHYRPDAMQLSLVGKLPSDIKSLIAQ
HHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCHHEEEEHHCCCHHHHHHHHH
HFNAWPTPNQPITEFDELKITPKPIHAELIDERGPWPGLLLAWHTVGKNHPDAAAMRLLE
HHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCCCEEEEHHCCCCCCHHHHHHHHH
GYLFQNTRSAIAQISQHDPAQMLSYSLPFELENHGITNLVLVPRAKTSLDDLTEKVLGVV
HHHHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCCCEEEEEECCCCCCHHHHHHHHHHHH
AKVQQTSLSDAELCQLKQTWLNNQLAQLDNTQSLATLLSATAKQDQMHPLTAQWQRINSV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
SAEDIQRVATRYFTTDMVRVDLLPPWYIRVGKTLLEWLPSGVSDSLEDAVL
CHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHCC
>Mature Secondary Structure
MRPYLSGYFGLVLALLSPSLKAQCQITGAERLYQLESQIETYTLANGLTVHLLPQADMHT
CCCCHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHEECCCCEEEEECCCCCHH
LSIASQFNVGARNEAKGQTGYAHLFEHMLFKGSEQAPGDSYAQQLSALGARFNASTHFDY
HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEE
TNYYVTLPSQALNLGLFLEGDRFIRPDLNQTTVKNQQETVLQEMAQTIDNQPYVRSAMEF
CEEEEECCHHHCCEEEEEECCEEECCCCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHH
LLEQVKDTPYGHGIIGSREDITEASPERLTAFHRDHYRPDAMQLSLVGKLPSDIKSLIAQ
HHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCHHEEEEHHCCCHHHHHHHHH
HFNAWPTPNQPITEFDELKITPKPIHAELIDERGPWPGLLLAWHTVGKNHPDAAAMRLLE
HHCCCCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCCCCEEEEHHCCCCCCHHHHHHHHH
GYLFQNTRSAIAQISQHDPAQMLSYSLPFELENHGITNLVLVPRAKTSLDDLTEKVLGVV
HHHHHHHHHHHHHHHCCCHHHHHHCCCCEEECCCCCEEEEEECCCCCCHHHHHHHHHHHH
AKVQQTSLSDAELCQLKQTWLNNQLAQLDNTQSLATLLSATAKQDQMHPLTAQWQRINSV
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
SAEDIQRVATRYFTTDMVRVDLLPPWYIRVGKTLLEWLPSGVSDSLEDAVL
CHHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]