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The map label for this gene is 117919239

Identifier: 117919239

GI number: 117919239

Start: 907993

End: 908496

Strand: Direct

Name: 117919239

Synonym: Shewana3_0787

Alternate gene names: NA

Gene position: 907993-908496 (Clockwise)

Preceding gene: 117919234

Following gene: 117919240

Centisome position: 18.26

GC content: 49.6

Gene sequence:

>504_bases
GTGGGCAAGGCGAATGCTGGCGATTCTCCCCATGTGTTGGGGGGCAGCTTAGGCTATGGCACTCAAGAATTTGAAACGAA
GAGCGGCAAATATGATGCGGGCGATACCTTCACCAGCGACTTGTATTATCGCTATATGCTTAACGACAACTTTGGCGTTG
AAGCAGGGTATTTAACGGGTTCTGGTGGTGTGGCAAGTGCGCTCGTTAGTACATTCAGCGAGATAAAAGATTTACGCTTC
CAAGGTGTTAGAGCTACCGCCTACGGCGAATATGCGCTCTCCCGCGGTAATAGTCTGTACGCCAAACTCGGCGCGGCTTA
CACCCAAGTGAGTTATGAGATGGATAAGCAAGAGATGGATTCGGACGATGTGGGCTTTTACGGCGCGGTCGGTTGGCAAT
ATCGTTTTCGCTCGGGCTTTGGGCTAAACCTTGAATACCAATATGTGCCAATGAAAGAGCTCGAGCTACAAGGGGTAAAC
TTTGGCATGAGTTATCGTTTCTAA

Upstream 100 bases:

>100_bases
GTTATGATGTGCCTACATCTGGATACTGAATTTAAACAATATGAAATACTTAACAATTAATACTTGGCTGTTGTCGTTCG
CACTGTTGGCTGGGGCTGTC

Downstream 100 bases:

>100_bases
CGACTTAGGTTTGCGGAATTAGGTTTGCGGAATCAGGTTTACTTAGTCATTCACTATCATTTAGTGGAGCAGTCTGTGTC
GATTAAGCGCCTTCGTGCGC

Product: OmpA-like transmembrane domain-containing protein

Products: NA

Alternate protein names: OmpA Domain-Containing Protein; OmpA-Like Transmembrane Domain Protein

Number of amino acids: Translated: 167; Mature: 166

Protein sequence:

>167_residues
MGKANAGDSPHVLGGSLGYGTQEFETKSGKYDAGDTFTSDLYYRYMLNDNFGVEAGYLTGSGGVASALVSTFSEIKDLRF
QGVRATAYGEYALSRGNSLYAKLGAAYTQVSYEMDKQEMDSDDVGFYGAVGWQYRFRSGFGLNLEYQYVPMKELELQGVN
FGMSYRF

Sequences:

>Translated_167_residues
MGKANAGDSPHVLGGSLGYGTQEFETKSGKYDAGDTFTSDLYYRYMLNDNFGVEAGYLTGSGGVASALVSTFSEIKDLRF
QGVRATAYGEYALSRGNSLYAKLGAAYTQVSYEMDKQEMDSDDVGFYGAVGWQYRFRSGFGLNLEYQYVPMKELELQGVN
FGMSYRF
>Mature_166_residues
GKANAGDSPHVLGGSLGYGTQEFETKSGKYDAGDTFTSDLYYRYMLNDNFGVEAGYLTGSGGVASALVSTFSEIKDLRFQ
GVRATAYGEYALSRGNSLYAKLGAAYTQVSYEMDKQEMDSDDVGFYGAVGWQYRFRSGFGLNLEYQYVPMKELELQGVNF
GMSYRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18430; Mature: 18298

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKANAGDSPHVLGGSLGYGTQEFETKSGKYDAGDTFTSDLYYRYMLNDNFGVEAGYLTG
CCCCCCCCCCCEECCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEC
SGGVASALVSTFSEIKDLRFQGVRATAYGEYALSRGNSLYAKLGAAYTQVSYEMDKQEMD
CCHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHCCCEEEEHHHHHHHHHEECCCHHHCC
SDDVGFYGAVGWQYRFRSGFGLNLEYQYVPMKELELQGVNFGMSYRF
CCCCCEEEEECEEEEECCCCCCCEEEEEECHHHEEEECCCCCEEECC
>Mature Secondary Structure 
GKANAGDSPHVLGGSLGYGTQEFETKSGKYDAGDTFTSDLYYRYMLNDNFGVEAGYLTG
CCCCCCCCCCEECCCCCCCCCHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEC
SGGVASALVSTFSEIKDLRFQGVRATAYGEYALSRGNSLYAKLGAAYTQVSYEMDKQEMD
CCHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHCCCEEEEHHHHHHHHHEECCCHHHCC
SDDVGFYGAVGWQYRFRSGFGLNLEYQYVPMKELELQGVNFGMSYRF
CCCCCEEEEECEEEEECCCCCCCEEEEEECHHHEEEECCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA