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The map label for this gene is priB [H]

Identifier: 117919154

GI number: 117919154

Start: 818705

End: 818995

Strand: Direct

Name: priB [H]

Synonym: Shewana3_0702

Alternate gene names: 117919154

Gene position: 818705-818995 (Clockwise)

Preceding gene: 117919153

Following gene: 117919155

Centisome position: 16.47

GC content: 46.39

Gene sequence:

>291_bases
TTGGTGTTGTCAGGAACCATAACCCGTTCCAGACGCTTTAAAAGCCCGGCAGGCATCGCACACAGTGTGATAATGCTAGA
ACACAAATCGCAGCGTTATGAAGCAGATATGCTCCGCAACGTCTACGTACAAATACAAGTGATATTGAGTGGCCCACGCT
TTGAGAGCGTGGCAGACAATCTGAAAGCAGGTGTGGAAGTACAAGTTCAAGGTTTTATGACGCTTCAACAGGGGCGAAAT
GGCCAAAATCGCTTAGTCATCCATGCCGAAAATGTCGAATTGAAAACTTAG

Upstream 100 bases:

>100_bases
ATGAGCGCGATTCACGTCGTGGCCCAGCTGGCGACCGCTCATATGATGAAGCTAACGCTGAAGAAATCGCTGAGTAAGTT
TATCTGTGACCACCAATAAC

Downstream 100 bases:

>100_bases
GAGACTGTCAAATGGCACGTTATTTCCGTCGTCGCAAGTTCTGCCGTTTCACCGCTGAAGGTGTTGCAGAAATTGATTAC
AAAGATATCGTTACTTTAAA

Product: primosomal replication protein N

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MVLSGTITRSRRFKSPAGIAHSVIMLEHKSQRYEADMLRNVYVQIQVILSGPRFESVADNLKAGVEVQVQGFMTLQQGRN
GQNRLVIHAENVELKT

Sequences:

>Translated_96_residues
MVLSGTITRSRRFKSPAGIAHSVIMLEHKSQRYEADMLRNVYVQIQVILSGPRFESVADNLKAGVEVQVQGFMTLQQGRN
GQNRLVIHAENVELKT
>Mature_96_residues
MVLSGTITRSRRFKSPAGIAHSVIMLEHKSQRYEADMLRNVYVQIQVILSGPRFESVADNLKAGVEVQVQGFMTLQQGRN
GQNRLVIHAENVELKT

Specific function: Binds single-stranded DNA at the primosome assembly site (PAS) [H]

COG id: COG2965

COG function: function code L; Primosomal replication protein N

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790645, Length=95, Percent_Identity=38.9473684210526, Blast_Score=79, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 10794; Mature: 10794

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLSGTITRSRRFKSPAGIAHSVIMLEHKSQRYEADMLRNVYVQIQVILSGPRFESVADN
CEECCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHEEEEEEEEEECCCCCHHHHHH
LKAGVEVQVQGFMTLQQGRNGQNRLVIHAENVELKT
HCCCEEEEEEEEEEEECCCCCCCEEEEEECCEEECC
>Mature Secondary Structure
MVLSGTITRSRRFKSPAGIAHSVIMLEHKSQRYEADMLRNVYVQIQVILSGPRFESVADN
CEECCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHEEEEEEEEEECCCCCHHHHHH
LKAGVEVQVQGFMTLQQGRNGQNRLVIHAENVELKT
HCCCEEEEEEEEEEEECCCCCCCEEEEEECCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA