Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919114
Identifier: 117919114
GI number: 117919114
Start: 783588
End: 783935
Strand: Direct
Name: 117919114
Synonym: Shewana3_0662
Alternate gene names: NA
Gene position: 783588-783935 (Clockwise)
Preceding gene: 117919112
Following gene: 117919115
Centisome position: 15.76
GC content: 52.01
Gene sequence:
>348_bases TTGGAAATCCTTATGTTGGCTCCGCTGCCGCCATCAGATAGCTCGCCCTTGGGAGTAAAACGGTCTGCGCCGCACATGGC GACGACTTCTACGTCTTCTCAAGAGGTGCAAGCAGAACTTAAAAAAGGCACTGAACCTCAAGAATCGAGTGATAACAATA CTCCGACAGAGGTCGGTGCCCTGCAATCTTTCGCCCATGGCGCACTTGGTTTGGCAGAACCTAAGACCCCTGAACCTCTT TGTGATCGCGAAACTCCACCTCAAGAGGGCAACCAAGGCTACTACAAAGCCGGGCAATTGCTGAAAGTCGCCGCAACCGT GGGCAGTGTGATAGCACTCTTTGTATAA
Upstream 100 bases:
>100_bases CAGAATTCAGGGCAACTTTTCCTATCTGAGTCACAACTTACTCGCTGTGATAATGCTAAGGTATTGAGTTAATGTTAGTT TTACTTTTCAGTATCTTGTA
Downstream 100 bases:
>100_bases ATCACAATGGATTTCAGTGTCTTGTTGCATGAGTCAATCGATGCGCTCGTTAAGCCAAGGTACAGGCAATAAGAGGTAAT TTTCAGCAGCTTTACTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MEILMLAPLPPSDSSPLGVKRSAPHMATTSTSSQEVQAELKKGTEPQESSDNNTPTEVGALQSFAHGALGLAEPKTPEPL CDRETPPQEGNQGYYKAGQLLKVAATVGSVIALFV
Sequences:
>Translated_115_residues MEILMLAPLPPSDSSPLGVKRSAPHMATTSTSSQEVQAELKKGTEPQESSDNNTPTEVGALQSFAHGALGLAEPKTPEPL CDRETPPQEGNQGYYKAGQLLKVAATVGSVIALFV >Mature_115_residues MEILMLAPLPPSDSSPLGVKRSAPHMATTSTSSQEVQAELKKGTEPQESSDNNTPTEVGALQSFAHGALGLAEPKTPEPL CDRETPPQEGNQGYYKAGQLLKVAATVGSVIALFV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12045; Mature: 12045
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEILMLAPLPPSDSSPLGVKRSAPHMATTSTSSQEVQAELKKGTEPQESSDNNTPTEVGA CCEEEECCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH LQSFAHGALGLAEPKTPEPLCDRETPPQEGNQGYYKAGQLLKVAATVGSVIALFV HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEILMLAPLPPSDSSPLGVKRSAPHMATTSTSSQEVQAELKKGTEPQESSDNNTPTEVGA CCEEEECCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHH LQSFAHGALGLAEPKTPEPLCDRETPPQEGNQGYYKAGQLLKVAATVGSVIALFV HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA