Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919105
Identifier: 117919105
GI number: 117919105
Start: 772874
End: 773989
Strand: Direct
Name: 117919105
Synonym: Shewana3_0653
Alternate gene names: NA
Gene position: 772874-773989 (Clockwise)
Preceding gene: 117919104
Following gene: 117919107
Centisome position: 15.54
GC content: 53.32
Gene sequence:
>1116_bases ATGCAACCGACTGCGTCGTCTTTAACCATTGGGGAGCTTGCCGCAGGGCAAGCACTCACCCTGCCGATTTACCACTTTAA GCCAAGTGGCCATGCCGCTGGCCCTAAAGTGTATATTCAGGCCAATGTCCACGGCGCCGAGGTGCAGGGCAACGCGGTGA TTTTTCAGTTGATGAAGCAGCTCGAGCGCTGCGACATCTTAGGGGAAATAACCTTAGTGCCCTTGGCAAATCCGCTGGGG ATCAATCAAAAGAGTGGCGAGTTTACGCTGGGGCGTTTTGACCCTATCACAGGGGCAAACTGGAACCGCGAGTACTTAAA TCACTCGATTGATTTAGCCGCTTGGTACCGTGAGCATGCTGAGCTGAGCGATAGCGCGCTTATCCAAGCTTACCGCAGCA CTTTAGTCGAGGCGTGTCAGCAGCGTTTACGCAATGAGTGGGGCGTGACGACTGGCCACAGATTAGCGGTTAACCTGCAG GCCATGGCCCACGAGGCGGATATAGTACTCGATCTGCATACTGGGCCTAAATCCTGTAAACACTTGTATTGCCCAGAATA TGATATTGCGGCGGCGCAGTATTTCTCGATTCCTTACACCTTAGTGATCCCCAATAGTTTTGGCGGGGCTATGGATGAAG CGGCATTTTGCCCTTGGTGGCAATTGAGTGAAGTCGCGAAAGCACAGGGGCGAGATCTCGAGATTGCCGTTTCGGCCTTT ACCTTAGAACTGGCGAGCCAAGAACGCATTTGCCTCGAGGATGCTTTAGTCGATGCTCAGGGGATTTTGGCCTACTTGAG TCATCGTGGGGTGATCGCCGAGCGAGTGGCGCCCGCAAAGATGCCGCGTTTTGGCTGTTATCTTAAGGATTACAAAAAGT ACCATGCGCCTATGGCGGGATTGGTGGAATATGTGGCGCCCGTGGGAGAGCAACTGGCGGCGGGTGAGACCTTAGTTAAT CTGCTGCGCCTTGACTTATATGGTAGTGAGCGGGAGCTGACGGCGCTTAGCTTGCCGCAGGATTGTGTGCCCATACTCCA TTTTGCCTCGGCGTCAGTGCATCAAGGCACCGAGCTGTATAAAGTCATGACAAATCTGTTTGAGTTGCCGCAGTAA
Upstream 100 bases:
>100_bases CAAGGTGCCAGCCCACATAACTTGTGCGTATTGGTAGCCGAATCTGAAGCGGCGCAAGTGGTTAAAGCGCTGCACGAAAA CCTGTTCGAAGGTGCGTAAT
Downstream 100 bases:
>100_bases CGGCAATCCACAAAACAAAACGCCAATCATGTGATTGGCGTTTTTTATTCCAATCTACAACCACTTAAAGCGATAGAAGA GTGCCATTTGCAGGGCGACC
Product: succinylglutamate desuccinylase/aspartoacylase
Products: NA
Alternate protein names: Deacylase; Succinylglutamate Desuccinylase; Amino Acid ABC Transporter-Like Protein; Arginine Catabolism Protein; Arginine/Ornithine Transport Operon(AotO) Protein; Succinylglutamate Desuccinylase / Aspartoacylase Family
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MQPTASSLTIGELAAGQALTLPIYHFKPSGHAAGPKVYIQANVHGAEVQGNAVIFQLMKQLERCDILGEITLVPLANPLG INQKSGEFTLGRFDPITGANWNREYLNHSIDLAAWYREHAELSDSALIQAYRSTLVEACQQRLRNEWGVTTGHRLAVNLQ AMAHEADIVLDLHTGPKSCKHLYCPEYDIAAAQYFSIPYTLVIPNSFGGAMDEAAFCPWWQLSEVAKAQGRDLEIAVSAF TLELASQERICLEDALVDAQGILAYLSHRGVIAERVAPAKMPRFGCYLKDYKKYHAPMAGLVEYVAPVGEQLAAGETLVN LLRLDLYGSERELTALSLPQDCVPILHFASASVHQGTELYKVMTNLFELPQ
Sequences:
>Translated_371_residues MQPTASSLTIGELAAGQALTLPIYHFKPSGHAAGPKVYIQANVHGAEVQGNAVIFQLMKQLERCDILGEITLVPLANPLG INQKSGEFTLGRFDPITGANWNREYLNHSIDLAAWYREHAELSDSALIQAYRSTLVEACQQRLRNEWGVTTGHRLAVNLQ AMAHEADIVLDLHTGPKSCKHLYCPEYDIAAAQYFSIPYTLVIPNSFGGAMDEAAFCPWWQLSEVAKAQGRDLEIAVSAF TLELASQERICLEDALVDAQGILAYLSHRGVIAERVAPAKMPRFGCYLKDYKKYHAPMAGLVEYVAPVGEQLAAGETLVN LLRLDLYGSERELTALSLPQDCVPILHFASASVHQGTELYKVMTNLFELPQ >Mature_371_residues MQPTASSLTIGELAAGQALTLPIYHFKPSGHAAGPKVYIQANVHGAEVQGNAVIFQLMKQLERCDILGEITLVPLANPLG INQKSGEFTLGRFDPITGANWNREYLNHSIDLAAWYREHAELSDSALIQAYRSTLVEACQQRLRNEWGVTTGHRLAVNLQ AMAHEADIVLDLHTGPKSCKHLYCPEYDIAAAQYFSIPYTLVIPNSFGGAMDEAAFCPWWQLSEVAKAQGRDLEIAVSAF TLELASQERICLEDALVDAQGILAYLSHRGVIAERVAPAKMPRFGCYLKDYKKYHAPMAGLVEYVAPVGEQLAAGETLVN LLRLDLYGSERELTALSLPQDCVPILHFASASVHQGTELYKVMTNLFELPQ
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40836; Mature: 40836
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPTASSLTIGELAAGQALTLPIYHFKPSGHAAGPKVYIQANVHGAEVQGNAVIFQLMKQ CCCCCCCCCHHHHCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCEECCCHHHHHHHHH LERCDILGEITLVPLANPLGINQKSGEFTLGRFDPITGANWNREYLNHSIDLAAWYREHA HHHCCHHCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHH ELSDSALIQAYRSTLVEACQQRLRNEWGVTTGHRLAVNLQAMAHEADIVLDLHTGPKSCK CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCEEEEEECCCCHHCC HLYCPEYDIAAAQYFSIPYTLVIPNSFGGAMDEAAFCPWWQLSEVAKAQGRDLEIAVSAF CCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEE TLELASQERICLEDALVDAQGILAYLSHRGVIAERVAPAKMPRFGCYLKDYKKYHAPMAG EEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCHHH LVEYVAPVGEQLAAGETLVNLLRLDLYGSERELTALSLPQDCVPILHFASASVHQGTELY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCHHCCHHHH KVMTNLFELPQ HHHHHHHCCCC >Mature Secondary Structure MQPTASSLTIGELAAGQALTLPIYHFKPSGHAAGPKVYIQANVHGAEVQGNAVIFQLMKQ CCCCCCCCCHHHHCCCCEEEEEEEEECCCCCCCCCEEEEEECCCCCEECCCHHHHHHHHH LERCDILGEITLVPLANPLGINQKSGEFTLGRFDPITGANWNREYLNHSIDLAAWYREHA HHHCCHHCCEEEEECCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHH ELSDSALIQAYRSTLVEACQQRLRNEWGVTTGHRLAVNLQAMAHEADIVLDLHTGPKSCK CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHCCCEEEEEECCCCHHCC HLYCPEYDIAAAQYFSIPYTLVIPNSFGGAMDEAAFCPWWQLSEVAKAQGRDLEIAVSAF CCCCCCCCCCHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEE TLELASQERICLEDALVDAQGILAYLSHRGVIAERVAPAKMPRFGCYLKDYKKYHAPMAG EEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCHHH LVEYVAPVGEQLAAGETLVNLLRLDLYGSERELTALSLPQDCVPILHFASASVHQGTELY HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCHHCCHHHH KVMTNLFELPQ HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA