Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919074
Identifier: 117919074
GI number: 117919074
Start: 727324
End: 727881
Strand: Direct
Name: 117919074
Synonym: Shewana3_0621
Alternate gene names: NA
Gene position: 727324-727881 (Clockwise)
Preceding gene: 117919073
Following gene: 117919075
Centisome position: 14.63
GC content: 50.54
Gene sequence:
>558_bases GTGCAGTATCAACCTATCAAATTAGCCGTTATTTTAGCGGGTGTGCTGGGCACCGCTGTACCTCAATTAGGCTGGTCTTC TGAGGCGAGCGATTGTGGTGAAGATAAAAAATGTAATGATTATCTGCGGGTATCTGGCGATGTGATGCGTCAGCCTGTTC ATCTAGTGAGCGATCCTAAACAGAACCGTTTGCCATTGCCTGCCTATGATGGCTCGGGATTTTTACGTTCTATCCCCGGA TTTAACATCACCCGCAAGGGCGGCTCCGGTGGCGATCCCATGTTTCGGGGGCTGGGCGGCTCGCGCTTAAACATAGTCGA TGATGGTCAGCATGTGTATGGCGCGAGCAGTGGTTTTGGTACCTTGGCACTCAATGCTTCTTGGTCATATAACAAGGATT TATCCTTAATTTTGGGTGTCGAAAACCTGTTTGATACCGCCTATGCCGAGCATGTGAGTAAGGCGGGTACGGGGAACGAT CTGCCTGGCAGTGAGGCCATGTTTAGGGTCAACGAGCCGGGCCGTAATCTCTGGGCTAAGTTGACCTATCAGTTCTAA
Upstream 100 bases:
>100_bases GACAGATTGTCGCGCCCAGCCGAGTTTTGATTGCGCTTCCCTATCCAGTAACAACAATACCCCCACAAAAATCATTAAAA ACAATATGTAGGGGAATATC
Downstream 100 bases:
>100_bases CTCGGCTTATTTGTACTATTGGCGCCCCGAGAGTCTTGCTGTCGGGGCGATGTTATTTTTAAGGCAAGCCAATGCCAAAC TGCGACGTATCAAAGCTAAG
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Copper Receptor OprC; Outer Membrane Copper Receptor; Outer Membrane Protein; NB Dependent Receptor; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Protein; Outer Membrane Receptor Protein; Outer Membrane Protein OprC Complement; NB-Dependent Receptor; Outer Membrane Protein Nosa; Nb-Dependent Copper Receptor; N-B Dependent Receptor; NosA Protein; Membrane Receptor Protein; Outer Membrane Receptor Proteins; Outer Membrane Protein OprC
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MQYQPIKLAVILAGVLGTAVPQLGWSSEASDCGEDKKCNDYLRVSGDVMRQPVHLVSDPKQNRLPLPAYDGSGFLRSIPG FNITRKGGSGGDPMFRGLGGSRLNIVDDGQHVYGASSGFGTLALNASWSYNKDLSLILGVENLFDTAYAEHVSKAGTGND LPGSEAMFRVNEPGRNLWAKLTYQF
Sequences:
>Translated_185_residues MQYQPIKLAVILAGVLGTAVPQLGWSSEASDCGEDKKCNDYLRVSGDVMRQPVHLVSDPKQNRLPLPAYDGSGFLRSIPG FNITRKGGSGGDPMFRGLGGSRLNIVDDGQHVYGASSGFGTLALNASWSYNKDLSLILGVENLFDTAYAEHVSKAGTGND LPGSEAMFRVNEPGRNLWAKLTYQF >Mature_185_residues MQYQPIKLAVILAGVLGTAVPQLGWSSEASDCGEDKKCNDYLRVSGDVMRQPVHLVSDPKQNRLPLPAYDGSGFLRSIPG FNITRKGGSGGDPMFRGLGGSRLNIVDDGQHVYGASSGFGTLALNASWSYNKDLSLILGVENLFDTAYAEHVSKAGTGND LPGSEAMFRVNEPGRNLWAKLTYQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19913; Mature: 19913
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYQPIKLAVILAGVLGTAVPQLGWSSEASDCGEDKKCNDYLRVSGDVMRQPVHLVSDPK CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCHHHHCCHHHHCCCC QNRLPLPAYDGSGFLRSIPGFNITRKGGSGGDPMFRGLGGSRLNIVDDGQHVYGASSGFG CCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCHHHHCCCCCEEEEEECCCEEEECCCCCE TLALNASWSYNKDLSLILGVENLFDTAYAEHVSKAGTGNDLPGSEAMFRVNEPGRNLWAK EEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEE LTYQF EEECC >Mature Secondary Structure MQYQPIKLAVILAGVLGTAVPQLGWSSEASDCGEDKKCNDYLRVSGDVMRQPVHLVSDPK CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCHHHHCCHHHHCCCC QNRLPLPAYDGSGFLRSIPGFNITRKGGSGGDPMFRGLGGSRLNIVDDGQHVYGASSGFG CCCCCCCCCCCCCHHHCCCCCEEEECCCCCCCHHHHCCCCCEEEEEECCCEEEECCCCCE TLALNASWSYNKDLSLILGVENLFDTAYAEHVSKAGTGNDLPGSEAMFRVNEPGRNLWAK EEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCEEEE LTYQF EEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA