Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117919044
Identifier: 117919044
GI number: 117919044
Start: 693763
End: 694218
Strand: Direct
Name: 117919044
Synonym: Shewana3_0591
Alternate gene names: NA
Gene position: 693763-694218 (Clockwise)
Preceding gene: 117919043
Following gene: 117919045
Centisome position: 13.95
GC content: 43.86
Gene sequence:
>456_bases ATGCGTATTCAACAATTGCGTGATTTACTTGAGTATGTGGCGAACTGCCGCTTAGATATGGCGCAACTCTATGGCCGACT GAACAATCAGGCCGATTCTGCCCGCGTGAAGATGATGCTGGAATATTTTGAGTCTCATCAAAAACATGTGGCTGAAAAAT TGCGCGATTATATGGATGAGGCGCCGGTTAGAGTATTAGATACTTGGTATAAAGACTTTGTATTTGAAGATTTTACCAAG CGCTGCCAAGACACTATGTTGCCCGCCAATATGACTGAAGATGATGTTCTGAATCTGCACCTCGATTTAGAAAATCGACT AATTGGCTTATTGGAAAAAACCGTTAACTCAACGACTGCCGAAGATGCCCGCACCGCACTTGAGGGTCTGATTCGGGTAG AGAAAACTCAGCAGCAACGTCTAGTGCATAGCACTATTCGGATGGATGATATCTAA
Upstream 100 bases:
>100_bases TTATGACCTTGTTCAAATATTCGCAACGCTTTTACTTACATAATGAATCCAGACAAAGTTAATAGCGCCAAGTAGTTGGC TTAACACTGGAGTGCATTAT
Downstream 100 bases:
>100_bases TCCGATGCCGAATGACCTTTCAAAGCCAGCGCAATGCTGGCTTTGTTGTCTTTACCGGATGAGTCTTTTTCACTTTGGAC GCTTTTTGCATGGCAACTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MRIQQLRDLLEYVANCRLDMAQLYGRLNNQADSARVKMMLEYFESHQKHVAEKLRDYMDEAPVRVLDTWYKDFVFEDFTK RCQDTMLPANMTEDDVLNLHLDLENRLIGLLEKTVNSTTAEDARTALEGLIRVEKTQQQRLVHSTIRMDDI
Sequences:
>Translated_151_residues MRIQQLRDLLEYVANCRLDMAQLYGRLNNQADSARVKMMLEYFESHQKHVAEKLRDYMDEAPVRVLDTWYKDFVFEDFTK RCQDTMLPANMTEDDVLNLHLDLENRLIGLLEKTVNSTTAEDARTALEGLIRVEKTQQQRLVHSTIRMDDI >Mature_151_residues MRIQQLRDLLEYVANCRLDMAQLYGRLNNQADSARVKMMLEYFESHQKHVAEKLRDYMDEAPVRVLDTWYKDFVFEDFTK RCQDTMLPANMTEDDVLNLHLDLENRLIGLLEKTVNSTTAEDARTALEGLIRVEKTQQQRLVHSTIRMDDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17825; Mature: 17825
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIQQLRDLLEYVANCRLDMAQLYGRLNNQADSARVKMMLEYFESHQKHVAEKLRDYMDE CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APVRVLDTWYKDFVFEDFTKRCQDTMLPANMTEDDVLNLHLDLENRLIGLLEKTVNSTTA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECHHHHHHHHHHHHHCCCCH EDARTALEGLIRVEKTQQQRLVHSTIRMDDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRIQQLRDLLEYVANCRLDMAQLYGRLNNQADSARVKMMLEYFESHQKHVAEKLRDYMDE CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APVRVLDTWYKDFVFEDFTKRCQDTMLPANMTEDDVLNLHLDLENRLIGLLEKTVNSTTA CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECHHHHHHHHHHHHHCCCCH EDARTALEGLIRVEKTQQQRLVHSTIRMDDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA