Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117918987
Identifier: 117918987
GI number: 117918987
Start: 626796
End: 627815
Strand: Direct
Name: 117918987
Synonym: Shewana3_0533
Alternate gene names: NA
Gene position: 626796-627815 (Clockwise)
Preceding gene: 117918986
Following gene: 117918988
Centisome position: 12.61
GC content: 48.82
Gene sequence:
>1020_bases ATGGGGATCTTTGAACGTTATTTAAGTGTCTGGGTTGGCTTGAGTATTCTCGCTGGGGTTGTGCTTGGTAATCTCGCACC AAATGTATTTGCTGCCGTTGCGGCGATTGAATTTGCCCATGTGAATTTGATTATTGCGTTATTTATCTGGGTGATGATCT ACCCCATGATGGTGCAAATTGACTTTTCGGCAGTCAAGAATGTCAGTAAAACTCCGAAGGGATTACTGCTAACGCTGACG ATTAACTGGCTGATTAAACCCTTTACCATGGCCTTACTTGGCTGGTTATTCTTTAAACTGGTGTTTGCCGATTGGGTCGA CCCGCAAACGGCGGGTGAATATATTGCGGGGATGATTCTCCTTGGTGTCGCCCCTTGCACCGCCATGGTGTTTGTCTGGA GCCAACTGACGAAGGGCGATCCTAACTACACTTTAGTGCAAGTCTCTGTTAACGATATCATTATGGTGTTTTTGTTTGCG CCGCTCTCTGCGTTGTTGCTGGGGGTGAGTGATATTCAAGTGCCATGGGGAACCCTGCTGCTATCTGTGGTGTTGTATGT CTTATTGCCCTTAGTCGCAGGAGTGCTCACCCGTAAACGTTTAGAGGCTCGTCATGACGCCACTGCCGTGCCGCAGTTAT TGGCTAAACTCAAACCTTGGTCTGTAATAGGACTACTCGCGACGGTTGTGCTGCTGTTCGGCTTTCAGGCCAAGACCATC CTTAGCCAACCGCAGAACATTCTATTAATCGCTATCCCATTGATTATTCAGAGCTATGGCATCTTTATCTTGACTTACTG GCTGGCGTTAAAGCTCAAACTGACCCATGCGATTGCCGCGCCCGCGAGCATGATAGGTTCTTCTAACTTCTTTGAGTTAG CCGTGGCCGTGGCGATTTCGCTCTTTGGCTTACATTCGGGGGCCGCGCTGGCGACCGTGGTGGGCGTGTTGGTTGAAGTG CCTGTGATGTTGTCTTTAGTGTACTTTGCCAATCGCACCCGTCATTGGTTTACGACTTAA
Upstream 100 bases:
>100_bases AGTATGCAAAACCTGTGCAGCATGGGAGCTCGTCCCGAACGTGCGAAAGCTTGCTGTTAAGTTAAGAAATGGATTCGCTA TTAGATAAGTAGAGGTCGTT
Downstream 100 bases:
>100_bases TCTGTTTTTAAAATAAATAATATTAAAAATCAATAAATTGAAAGTTAACTAGGTAGTTATAAATCATGGCAATTAAAATC GGGATTAATGGATTTGGGCG
Product: bile acid:sodium symporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MGIFERYLSVWVGLSILAGVVLGNLAPNVFAAVAAIEFAHVNLIIALFIWVMIYPMMVQIDFSAVKNVSKTPKGLLLTLT INWLIKPFTMALLGWLFFKLVFADWVDPQTAGEYIAGMILLGVAPCTAMVFVWSQLTKGDPNYTLVQVSVNDIIMVFLFA PLSALLLGVSDIQVPWGTLLLSVVLYVLLPLVAGVLTRKRLEARHDATAVPQLLAKLKPWSVIGLLATVVLLFGFQAKTI LSQPQNILLIAIPLIIQSYGIFILTYWLALKLKLTHAIAAPASMIGSSNFFELAVAVAISLFGLHSGAALATVVGVLVEV PVMLSLVYFANRTRHWFTT
Sequences:
>Translated_339_residues MGIFERYLSVWVGLSILAGVVLGNLAPNVFAAVAAIEFAHVNLIIALFIWVMIYPMMVQIDFSAVKNVSKTPKGLLLTLT INWLIKPFTMALLGWLFFKLVFADWVDPQTAGEYIAGMILLGVAPCTAMVFVWSQLTKGDPNYTLVQVSVNDIIMVFLFA PLSALLLGVSDIQVPWGTLLLSVVLYVLLPLVAGVLTRKRLEARHDATAVPQLLAKLKPWSVIGLLATVVLLFGFQAKTI LSQPQNILLIAIPLIIQSYGIFILTYWLALKLKLTHAIAAPASMIGSSNFFELAVAVAISLFGLHSGAALATVVGVLVEV PVMLSLVYFANRTRHWFTT >Mature_338_residues GIFERYLSVWVGLSILAGVVLGNLAPNVFAAVAAIEFAHVNLIIALFIWVMIYPMMVQIDFSAVKNVSKTPKGLLLTLTI NWLIKPFTMALLGWLFFKLVFADWVDPQTAGEYIAGMILLGVAPCTAMVFVWSQLTKGDPNYTLVQVSVNDIIMVFLFAP LSALLLGVSDIQVPWGTLLLSVVLYVLLPLVAGVLTRKRLEARHDATAVPQLLAKLKPWSVIGLLATVVLLFGFQAKTIL SQPQNILLIAIPLIIQSYGIFILTYWLALKLKLTHAIAAPASMIGSSNFFELAVAVAISLFGLHSGAALATVVGVLVEVP VMLSLVYFANRTRHWFTT
Specific function: Unknown
COG id: COG0798
COG function: function code P; Arsenite efflux pump ACR3 and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ACR3 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325459, Length=313, Percent_Identity=25.8785942492013, Blast_Score=90, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004706 - InterPro: IPR002657 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 36992; Mature: 36861
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFERYLSVWVGLSILAGVVLGNLAPNVFAAVAAIEFAHVNLIIALFIWVMIYPMMVQI CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE DFSAVKNVSKTPKGLLLTLTINWLIKPFTMALLGWLFFKLVFADWVDPQTAGEYIAGMIL EHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LGVAPCTAMVFVWSQLTKGDPNYTLVQVSVNDIIMVFLFAPLSALLLGVSDIQVPWGTLL HHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LSVVLYVLLPLVAGVLTRKRLEARHDATAVPQLLAKLKPWSVIGLLATVVLLFGFQAKTI HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHH LSQPQNILLIAIPLIIQSYGIFILTYWLALKLKLTHAIAAPASMIGSSNFFELAVAVAIS HCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LFGLHSGAALATVVGVLVEVPVMLSLVYFANRTRHWFTT HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure GIFERYLSVWVGLSILAGVVLGNLAPNVFAAVAAIEFAHVNLIIALFIWVMIYPMMVQI CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE DFSAVKNVSKTPKGLLLTLTINWLIKPFTMALLGWLFFKLVFADWVDPQTAGEYIAGMIL EHHHHHCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH LGVAPCTAMVFVWSQLTKGDPNYTLVQVSVNDIIMVFLFAPLSALLLGVSDIQVPWGTLL HHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH LSVVLYVLLPLVAGVLTRKRLEARHDATAVPQLLAKLKPWSVIGLLATVVLLFGFQAKTI HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHH LSQPQNILLIAIPLIIQSYGIFILTYWLALKLKLTHAIAAPASMIGSSNFFELAVAVAIS HCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LFGLHSGAALATVVGVLVEVPVMLSLVYFANRTRHWFTT HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]