Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117918973
Identifier: 117918973
GI number: 117918973
Start: 610837
End: 611160
Strand: Direct
Name: 117918973
Synonym: Shewana3_0519
Alternate gene names: NA
Gene position: 610837-611160 (Clockwise)
Preceding gene: 117918972
Following gene: 117918976
Centisome position: 12.29
GC content: 48.46
Gene sequence:
>324_bases ATGATCGCAGTCATTTTTGAAGTCGTGCCCACGAAAGAAGGCAAGGAAGAATATCTGCACGTGGCCGCTGAAATGCGCCA ATATTTAGAAGGGCGTCAGGGGTTGATTTCAATTGAACGGTTTCAGAGCTTAACCGACGATGGCAAAGTGCTGAGCCTGT CGTTTTGGGATGATATGGCCTCTATTACCCAATGGCGTAATCAAATGGCCCACAGCATTGCTGAGCAATCCGGCATTGTG CCTTGCTTATTTAACTCTTATCGCATCCGCGTTGCCGAAGTGGTGCAAGACTATAGTGAAACAGTGCACGACGTGCCCGA GTAA
Upstream 100 bases:
>100_bases GGCAAGGCTCAATGTTAAAGTTAAAAATCAGTGAGCTATCGTGCGCGATCTAGGCTAGGCTTAGCTCTGGTATTAAGGAT TACTATCTTTGGAGAGCATT
Downstream 100 bases:
>100_bases GCTAAGCGCTTATATAAAAACAAAACCCATCGAAGTCGATGGGTTTTTTATTGCAATCAATCAGATAAAAAATAGCGTTA GCTTACTTTTCTTGCTGCGC
Product: antibiotic biosynthesis monooxygenase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Monooxygenase; Antibiotic Biosynthesis Monooxygenase Domain Protein; Extracellular Polysaccharide Biosynthesis Protein; Antibiotic Biosynthesis Monooxygenase Family
Number of amino acids: Translated: 107; Mature: 107
Protein sequence:
>107_residues MIAVIFEVVPTKEGKEEYLHVAAEMRQYLEGRQGLISIERFQSLTDDGKVLSLSFWDDMASITQWRNQMAHSIAEQSGIV PCLFNSYRIRVAEVVQDYSETVHDVPE
Sequences:
>Translated_107_residues MIAVIFEVVPTKEGKEEYLHVAAEMRQYLEGRQGLISIERFQSLTDDGKVLSLSFWDDMASITQWRNQMAHSIAEQSGIV PCLFNSYRIRVAEVVQDYSETVHDVPE >Mature_107_residues MIAVIFEVVPTKEGKEEYLHVAAEMRQYLEGRQGLISIERFQSLTDDGKVLSLSFWDDMASITQWRNQMAHSIAEQSGIV PCLFNSYRIRVAEVVQDYSETVHDVPE
Specific function: Unknown
COG id: COG2329
COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12279; Mature: 12279
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAVIFEVVPTKEGKEEYLHVAAEMRQYLEGRQGLISIERFQSLTDDGKVLSLSFWDDMA CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEHHHHHH SITQWRNQMAHSIAEQSGIVPCLFNSYRIRVAEVVQDYSETVHDVPE HHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MIAVIFEVVPTKEGKEEYLHVAAEMRQYLEGRQGLISIERFQSLTDDGKVLSLSFWDDMA CEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEEHHHHHH SITQWRNQMAHSIAEQSGIVPCLFNSYRIRVAEVVQDYSETVHDVPE HHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA