Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117918929
Identifier: 117918929
GI number: 117918929
Start: 550973
End: 552034
Strand: Direct
Name: 117918929
Synonym: Shewana3_0474
Alternate gene names: NA
Gene position: 550973-552034 (Clockwise)
Preceding gene: 117918925
Following gene: 117918930
Centisome position: 11.08
GC content: 55.84
Gene sequence:
>1062_bases ATGCCGTGCCGACTAACACAATTGTTTGGGATCCAGTTTCCGATTATTCAAGCGCCGATGGCGGGCGTGCAGGGCAGTGC ACTGGCGATTGAAGTATCGCAGGCGGGCGGATTGGGCTCCTTGCCCTGCGCTATGTTATCCCTCGAGGCACTAGAAGCTG AGTTAACCGAAATCCGAGCCAACACCACTAAATCTATCAATGTGAATTTCTTTTGCCATAGCGAGCCTTTACCGCAAGCG GCCAAGCAAGCGGCTTGGCTCGAACAGTTAGCACCCTATTTTGCGGAATTTAATCTCGACCCAAATGCGCAGCCTGCTGG CGCCCAGCGCACACCCTACAGCAAGGCGCAGGCTGAGGTGTTAGCCAAATTTAAGCCCGAGGTGGTGAGTTTTCATTTTG GGCTGCCCGATGAAGAATTGCTGCTGGAAATCAAATCCTGGGGCTCAAAAGTTATCTCCGCGGCGACCACAGTCGAGGAG GCGCTCTGGCTCGAGGCTCGCGGCGCCGATGCGATTATTGCCCAAGGCTTGGAGGCGGGTGGGCATAGAGGGCACTTTTT ATCCGAGGATTTAACCGAGCAGCAGGGGACCTTTAGTTTATTACCGCAGGTGATTGCGGCTGTCGATATTCCGGTGATTG CCGCAGGTGGCATTGTCGATGCCACCACAGTGCGCGCTGCCATGGCAATGGGGGCTTCGGCGGTGCAGGTGGGGACAGCT TATTTACTCTGCCCCGAGTGCAACACCAGCAGCATTCATCGTGAGGCGCTGCAAAGCGACGCTGCGCAGCATACGGCACT GACGAACTTATTTTCTGGTCGACCCGCCCGCGGCATAGTGAACCGCTTTATGGCCGAAATGGGGCCGATAAATGAGGCCG TGCCAGATTTCCCCTTGGCATCCTCGGCGGTTGCAGGCTTAAGAACGGCAGCGGAGAGGCAAGGATTTGGAGATTTTAGC CCGCTATGGTGCGGACAAAATGCCAGTGGTTGCCAAAACATTCCCGCAGCCGAGTTGACGCGGCAGTTAGCTTTAGGCTT GATGGGGTCATTATCTGGCTGA
Upstream 100 bases:
>100_bases AGATTGTAACAACTCGCACTCGGCTCGGTCGCTTATCGCCGCATTAGCTGTAAGCAAACAAGCACGAGTCGCTACAGGAT TTATTCAATGGAGGTGAAGT
Downstream 100 bases:
>100_bases TTATTTTTAATTCAACCTTGTCTCCATGGCCGTCGCTCCCCATATCACCACTAAGCCAATTGAGGAGTTTGGTGTTCATT ATCATGGGGATGAGGGTTAT
Product: 2-nitropropane dioxygenase, NPD
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MPCRLTQLFGIQFPIIQAPMAGVQGSALAIEVSQAGGLGSLPCAMLSLEALEAELTEIRANTTKSINVNFFCHSEPLPQA AKQAAWLEQLAPYFAEFNLDPNAQPAGAQRTPYSKAQAEVLAKFKPEVVSFHFGLPDEELLLEIKSWGSKVISAATTVEE ALWLEARGADAIIAQGLEAGGHRGHFLSEDLTEQQGTFSLLPQVIAAVDIPVIAAGGIVDATTVRAAMAMGASAVQVGTA YLLCPECNTSSIHREALQSDAAQHTALTNLFSGRPARGIVNRFMAEMGPINEAVPDFPLASSAVAGLRTAAERQGFGDFS PLWCGQNASGCQNIPAAELTRQLALGLMGSLSG
Sequences:
>Translated_353_residues MPCRLTQLFGIQFPIIQAPMAGVQGSALAIEVSQAGGLGSLPCAMLSLEALEAELTEIRANTTKSINVNFFCHSEPLPQA AKQAAWLEQLAPYFAEFNLDPNAQPAGAQRTPYSKAQAEVLAKFKPEVVSFHFGLPDEELLLEIKSWGSKVISAATTVEE ALWLEARGADAIIAQGLEAGGHRGHFLSEDLTEQQGTFSLLPQVIAAVDIPVIAAGGIVDATTVRAAMAMGASAVQVGTA YLLCPECNTSSIHREALQSDAAQHTALTNLFSGRPARGIVNRFMAEMGPINEAVPDFPLASSAVAGLRTAAERQGFGDFS PLWCGQNASGCQNIPAAELTRQLALGLMGSLSG >Mature_352_residues PCRLTQLFGIQFPIIQAPMAGVQGSALAIEVSQAGGLGSLPCAMLSLEALEAELTEIRANTTKSINVNFFCHSEPLPQAA KQAAWLEQLAPYFAEFNLDPNAQPAGAQRTPYSKAQAEVLAKFKPEVVSFHFGLPDEELLLEIKSWGSKVISAATTVEEA LWLEARGADAIIAQGLEAGGHRGHFLSEDLTEQQGTFSLLPQVIAAVDIPVIAAGGIVDATTVRAAMAMGASAVQVGTAY LLCPECNTSSIHREALQSDAAQHTALTNLFSGRPARGIVNRFMAEMGPINEAVPDFPLASSAVAGLRTAAERQGFGDFSP LWCGQNASGCQNIPAAELTRQLALGLMGSLSG
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=324, Percent_Identity=30.2469135802469, Blast_Score=134, Evalue=2e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 37129; Mature: 36997
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCRLTQLFGIQFPIIQAPMAGVQGSALAIEVSQAGGLGSLPCAMLSLEALEAELTEIRA CCCCHHHHHCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHC NTTKSINVNFFCHSEPLPQAAKQAAWLEQLAPYFAEFNLDPNAQPAGAQRTPYSKAQAEV CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH LAKFKPEVVSFHFGLPDEELLLEIKSWGSKVISAATTVEEALWLEARGADAIIAQGLEAG HHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC GHRGHFLSEDLTEQQGTFSLLPQVIAAVDIPVIAAGGIVDATTVRAAMAMGASAVQVGTA CCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCHHHHHCEE YLLCPECNTSSIHREALQSDAAQHTALTNLFSGRPARGIVNRFMAEMGPINEAVPDFPLA EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCCCH SSAVAGLRTAAERQGFGDFSPLWCGQNASGCQNIPAAELTRQLALGLMGSLSG HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PCRLTQLFGIQFPIIQAPMAGVQGSALAIEVSQAGGLGSLPCAMLSLEALEAELTEIRA CCCHHHHHCCCCCHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHC NTTKSINVNFFCHSEPLPQAAKQAAWLEQLAPYFAEFNLDPNAQPAGAQRTPYSKAQAEV CCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH LAKFKPEVVSFHFGLPDEELLLEIKSWGSKVISAATTVEEALWLEARGADAIIAQGLEAG HHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC GHRGHFLSEDLTEQQGTFSLLPQVIAAVDIPVIAAGGIVDATTVRAAMAMGASAVQVGTA CCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHHCCHHHHHCEE YLLCPECNTSSIHREALQSDAAQHTALTNLFSGRPARGIVNRFMAEMGPINEAVPDFPLA EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHCCCCCCCH SSAVAGLRTAAERQGFGDFSPLWCGQNASGCQNIPAAELTRQLALGLMGSLSG HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA