Definition | Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence. |
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Accession | NC_008577 |
Length | 4,972,204 |
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The map label for this gene is 117918846
Identifier: 117918846
GI number: 117918846
Start: 450488
End: 450682
Strand: Direct
Name: 117918846
Synonym: Shewana3_0389
Alternate gene names: NA
Gene position: 450488-450682 (Clockwise)
Preceding gene: 117918844
Following gene: 117918847
Centisome position: 9.06
GC content: 46.67
Gene sequence:
>195_bases ATGTTGAGAAAAATGAGACTGTTTTTATTGTTATTGCTTGGTAGCCTATTCATTACAGCATGCGGTCAAAAAGGCCCCCT GTATAAATCCTCTCCCGCAGAGGTGAGTCAGCCTACAAAAATCAAGGCGCCGAAGAGTGAGGCAACCCCTGCCGACACGG CGGCGCCTCAAGCTGAAACTGAAAAAACACAATAA
Upstream 100 bases:
>100_bases GAGCTGGTGAAATTCTGTATCTGTCATGGCCATGCATTTCTGTCCTTTGCTTTCGTCAAGATGGGTGCGATTATAAGGCT ATTAGTCACCAGATGCACAG
Downstream 100 bases:
>100_bases TAATCAGCATAATTACAACAAAGCGCAGTAAGGAATCGGACATTGGATCACTTTCTCTACCAAGACAATACCCTGTACGC CGAAGGCTGTCGGGTCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 64
Protein sequence:
>64_residues MLRKMRLFLLLLLGSLFITACGQKGPLYKSSPAEVSQPTKIKAPKSEATPADTAAPQAETEKTQ
Sequences:
>Translated_64_residues MLRKMRLFLLLLLGSLFITACGQKGPLYKSSPAEVSQPTKIKAPKSEATPADTAAPQAETEKTQ >Mature_64_residues MLRKMRLFLLLLLGSLFITACGQKGPLYKSSPAEVSQPTKIKAPKSEATPADTAAPQAETEKTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6903; Mature: 6903
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKMRLFLLLLLGSLFITACGQKGPLYKSSPAEVSQPTKIKAPKSEATPADTAAPQAET CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EKTQ CCCC >Mature Secondary Structure MLRKMRLFLLLLLGSLFITACGQKGPLYKSSPAEVSQPTKIKAPKSEATPADTAAPQAET CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EKTQ CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA