Click here to switch to the map view.

The map label for this gene is dtd [H]

Identifier: 117918771

GI number: 117918771

Start: 351904

End: 352341

Strand: Direct

Name: dtd [H]

Synonym: Shewana3_0314

Alternate gene names: 117918771

Gene position: 351904-352341 (Clockwise)

Preceding gene: 117918770

Following gene: 117918772

Centisome position: 7.08

GC content: 51.37

Gene sequence:

>438_bases
GTGATCGCGTTAATTCAAAGAGTGAGCCGCGCCAGCGTGGTGGTGGACAATCAAACCATAGGTGCAATCGATAAGGGCTT
GTTAGTTTTACTTGGGGTTGAGCGGGAAGATAACCGCGAGAAGATGGAAAAATTAGCCACTAAAGTGATGAGTTATCGGG
TGTTTTCCGATGAAAATGGCAAGATGAATCTCAACTTAACTCAGGCGGGAGGCTCGCTTTTAGTGGTTTCGCAATTTACC
TTGGCCGCCGACACTGGCCGTGGCCTGCGCCCGAGCTTTTCGGGGGCGGGTACTCCTGAGCAAGCGCTTGGTCTATATGA
AGACTTTGTCGCCTTTTGCCGTGCGCAGGGCGTGACCACAGAAACAGGGCAATTTGGTGCCGACATGAAGGTCGAGCTAA
TCAACGATGGCCCTGTGACCTTCAATTTGCAGGTGTAA

Upstream 100 bases:

>100_bases
TTTAGCTGAAATTGCCCAGTCATTACCCGAAGGTGTGGAGCAGTATCTGCGTCCTATCCCATTGATGCCCCTCGTTAAGT
CTTAATTTAAAGGAAAAGTT

Downstream 100 bases:

>100_bases
CCCACAGGACAGTGTGCCAACGGCAGTAAGGACATGCACATGGATGAATTATTAAACCAATTGCGCCAGACCTGGCACAG
CACCATTCCCGTTAGCGAGT

Product: D-tyrosyl-tRNA(Tyr) deacylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MIALIQRVSRASVVVDNQTIGAIDKGLLVLLGVEREDNREKMEKLATKVMSYRVFSDENGKMNLNLTQAGGSLLVVSQFT
LAADTGRGLRPSFSGAGTPEQALGLYEDFVAFCRAQGVTTETGQFGADMKVELINDGPVTFNLQV

Sequences:

>Translated_145_residues
MIALIQRVSRASVVVDNQTIGAIDKGLLVLLGVEREDNREKMEKLATKVMSYRVFSDENGKMNLNLTQAGGSLLVVSQFT
LAADTGRGLRPSFSGAGTPEQALGLYEDFVAFCRAQGVTTETGQFGADMKVELINDGPVTFNLQV
>Mature_145_residues
MIALIQRVSRASVVVDNQTIGAIDKGLLVLLGVEREDNREKMEKLATKVMSYRVFSDENGKMNLNLTQAGGSLLVVSQFT
LAADTGRGLRPSFSGAGTPEQALGLYEDFVAFCRAQGVTTETGQFGADMKVELINDGPVTFNLQV

Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr). Could be a defense mechanism against a harmful effect of D-tyrosine [H]

COG id: COG1490

COG function: function code J; D-Tyr-tRNAtyr deacylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DTD family [H]

Homologues:

Organism=Homo sapiens, GI30795227, Length=147, Percent_Identity=40.8163265306122, Blast_Score=103, Evalue=7e-23,
Organism=Escherichia coli, GI1790320, Length=145, Percent_Identity=62.7586206896552, Blast_Score=189, Evalue=5e-50,
Organism=Caenorhabditis elegans, GI115533292, Length=143, Percent_Identity=36.3636363636364, Blast_Score=86, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6319982, Length=146, Percent_Identity=40.4109589041096, Blast_Score=109, Evalue=2e-25,
Organism=Drosophila melanogaster, GI281361569, Length=146, Percent_Identity=36.986301369863, Blast_Score=87, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003732 [H]

Pfam domain/function: PF02580 Tyr_Deacylase [H]

EC number: NA

Molecular weight: Translated: 15630; Mature: 15630

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIALIQRVSRASVVVDNQTIGAIDKGLLVLLGVEREDNREKMEKLATKVMSYRVFSDENG
CHHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHEEEEECCCC
KMNLNLTQAGGSLLVVSQFTLAADTGRGLRPSFSGAGTPEQALGLYEDFVAFCRAQGVTT
EEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
ETGQFGADMKVELINDGPVTFNLQV
CCCCCCCCEEEEEECCCCEEEEEEC
>Mature Secondary Structure
MIALIQRVSRASVVVDNQTIGAIDKGLLVLLGVEREDNREKMEKLATKVMSYRVFSDENG
CHHHHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHEEEEECCCC
KMNLNLTQAGGSLLVVSQFTLAADTGRGLRPSFSGAGTPEQALGLYEDFVAFCRAQGVTT
EEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
ETGQFGADMKVELINDGPVTFNLQV
CCCCCCCCEEEEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA