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The map label for this gene is uidR [C]

Identifier: 117918749

GI number: 117918749

Start: 324598

End: 325209

Strand: Direct

Name: uidR [C]

Synonym: Shewana3_0292

Alternate gene names: 117918749

Gene position: 324598-325209 (Clockwise)

Preceding gene: 117918744

Following gene: 117918751

Centisome position: 6.53

GC content: 50.98

Gene sequence:

>612_bases
ATGGCAGAAAAAGCAGTGAAACTGACACATTCCCAACTGAAGCGTTTAGCGATCCTCGACGCGTCACAGGAAGAATTTAT
GGTCAATGGTTTTGCCGGCGCCAGCATGGATAGAATTGCCCAGCGTGCCAATGTCTCCAAGCGCACCGTTTACAACCATT
TCCCCAGCAAAGAAGTGTTATTCGAGGCGACAACAAGTGACCTGTGGGCACGGACCAAGGAAGCGGCCACCTTGGCATTT
AATCCCGAGCAAAGCCTTGAGTCTCAATTGCAACACATCGCGCGCCGCTGCTGGGAGCTGTATCAGCAACCGGATTTCCT
GCGAGTGGCAAGGGTAGTGATGGCAGAGTTTATTCGGTCACCGGTTCAAGCGACCGAGGCCATGGAACGATTAGCCAAGC
AAGAGGGTGGATTAGAGGCGTGGCTTGCCGGAGCCGTGGCTCATAAGGCGTTGAAAATCGATAATATCCCTCTGGCGGCC
ACTCAGTTTTGGGGCATGTTTAAGGCATTCGCCTTTTGGCCTAAATTGTTCCATATGAAAAGTCATGACGAGTACCAACA
AGATATTATCGATGCCAATATCCGTATGTTTCTCGCCATGTATCGCGCTTAG

Upstream 100 bases:

>100_bases
ACTTGATAAAAGTAAACTACACAGTGTAGTTTACTCAGGGTTGTGCAAAAGTAAACTCAATAGTGTAAAATATCGGCAAA
TATTTTGATGGCGTACCGCA

Downstream 100 bases:

>100_bases
TTTTTTCTTTCGTATCAATCATAAGGCCGATAATACTTTCACATTATCGGCCTTATGTGTTTTATCGCTTCAAACCGTGC
TTACAGTAAGGTGGTCGCCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; TetR Family Transcriptional Regulatory Protein; TetR-Family Transcriptional Regulator; Transcriptional Regulator Protein; TetR Family Regulatory Protein; Transcriptional Regulator TetR

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MAEKAVKLTHSQLKRLAILDASQEEFMVNGFAGASMDRIAQRANVSKRTVYNHFPSKEVLFEATTSDLWARTKEAATLAF
NPEQSLESQLQHIARRCWELYQQPDFLRVARVVMAEFIRSPVQATEAMERLAKQEGGLEAWLAGAVAHKALKIDNIPLAA
TQFWGMFKAFAFWPKLFHMKSHDEYQQDIIDANIRMFLAMYRA

Sequences:

>Translated_203_residues
MAEKAVKLTHSQLKRLAILDASQEEFMVNGFAGASMDRIAQRANVSKRTVYNHFPSKEVLFEATTSDLWARTKEAATLAF
NPEQSLESQLQHIARRCWELYQQPDFLRVARVVMAEFIRSPVQATEAMERLAKQEGGLEAWLAGAVAHKALKIDNIPLAA
TQFWGMFKAFAFWPKLFHMKSHDEYQQDIIDANIRMFLAMYRA
>Mature_202_residues
AEKAVKLTHSQLKRLAILDASQEEFMVNGFAGASMDRIAQRANVSKRTVYNHFPSKEVLFEATTSDLWARTKEAATLAFN
PEQSLESQLQHIARRCWELYQQPDFLRVARVVMAEFIRSPVQATEAMERLAKQEGGLEAWLAGAVAHKALKIDNIPLAAT
QFWGMFKAFAFWPKLFHMKSHDEYQQDIIDANIRMFLAMYRA

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23253; Mature: 23122

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKAVKLTHSQLKRLAILDASQEEFMVNGFAGASMDRIAQRANVSKRTVYNHFPSKEVL
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHCCCCHHHH
FEATTSDLWARTKEAATLAFNPEQSLESQLQHIARRCWELYQQPDFLRVARVVMAEFIRS
HHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
PVQATEAMERLAKQEGGLEAWLAGAVAHKALKIDNIPLAATQFWGMFKAFAFWPKLFHMK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
SHDEYQQDIIDANIRMFLAMYRA
CCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AEKAVKLTHSQLKRLAILDASQEEFMVNGFAGASMDRIAQRANVSKRTVYNHFPSKEVL
CCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHCCCCHHHH
FEATTSDLWARTKEAATLAFNPEQSLESQLQHIARRCWELYQQPDFLRVARVVMAEFIRS
HHHHHHHHHHHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
PVQATEAMERLAKQEGGLEAWLAGAVAHKALKIDNIPLAATQFWGMFKAFAFWPKLFHMK
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
SHDEYQQDIIDANIRMFLAMYRA
CCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA