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The map label for this gene is 117918630

Identifier: 117918630

GI number: 117918630

Start: 204617

End: 205228

Strand: Direct

Name: 117918630

Synonym: Shewana3_0172

Alternate gene names: NA

Gene position: 204617-205228 (Clockwise)

Preceding gene: 117918629

Following gene: 117918631

Centisome position: 4.12

GC content: 47.39

Gene sequence:

>612_bases
ATGGCGAGACGCAAAGAACATAGTCATGATGAGATTCGTGCTATGGCAATAGAAGCGGCAATGGCGCTGCTGCAACAGCA
AGGGACACAGGAGCTGAGTTTGCGCAAGATTGCTAGCCAGATTGGCTATGTGCCGAGTACCTTAATCAATATCTTTGGTA
GCTATAACTACCTTCTATTAGCCGTTTCTGAGGCAACGTTGCAGGCACTGATGCATGAGCTCTCCGAGGTAAATGCTGAG
AATAGTCGCAATCAAATCATTAGCATGGCGCAAAAATACGCTGAGTTTGCCCATGCACAGCGCCAATGTTTTAAGTTGGT
ATTTGAACTGCAGCTACTCGACTCAGAACCTTTGCCCGAATCCCAAGGCCAGCTTATCGCAGGTTTATTCAGGTTAATTG
AACGTGAGTTAGCCCTGTTGTTCCCCCATAAAACTGCTGAGCAGCAACTCCAAATGAGCCGAGTACTCTGGGGCGGCATC
CACGGCCTCACTGCCTTATCACTGGATAATAAATTGTTTGCCGATACGGCATCTTTACCCGCTTTGTTAGAGAGTCATGT
GACAGGGTATTTACAGGGAATGGGTTATCAGAGGGAAGAGTCATGCTGCTAA

Upstream 100 bases:

>100_bases
CCTTTTATTTCATGCTGTACGCAAAATAAACTTATTTTGAACGTTGTTTTTTTATTTTTTAGGCTGTTAATCTCACTGCA
TTCAACAGGGAGTGAGACCT

Downstream 100 bases:

>100_bases
CAAAACGTTTTTTACCGTATTTTGCTACCCAATGCCTTGGGGCACTTAACGACAATATCTATAAAAATGTGTTGTTGCTG
CTGGTTACCTTCAGTCAAGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator TetR Family; AcrR Transcriptional Regulator; HTH-Type Transcriptional Regulator; TetR-Family Transcriptional Regulator; Regulatory Protein TetR

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MARRKEHSHDEIRAMAIEAAMALLQQQGTQELSLRKIASQIGYVPSTLINIFGSYNYLLLAVSEATLQALMHELSEVNAE
NSRNQIISMAQKYAEFAHAQRQCFKLVFELQLLDSEPLPESQGQLIAGLFRLIERELALLFPHKTAEQQLQMSRVLWGGI
HGLTALSLDNKLFADTASLPALLESHVTGYLQGMGYQREESCC

Sequences:

>Translated_203_residues
MARRKEHSHDEIRAMAIEAAMALLQQQGTQELSLRKIASQIGYVPSTLINIFGSYNYLLLAVSEATLQALMHELSEVNAE
NSRNQIISMAQKYAEFAHAQRQCFKLVFELQLLDSEPLPESQGQLIAGLFRLIERELALLFPHKTAEQQLQMSRVLWGGI
HGLTALSLDNKLFADTASLPALLESHVTGYLQGMGYQREESCC
>Mature_202_residues
ARRKEHSHDEIRAMAIEAAMALLQQQGTQELSLRKIASQIGYVPSTLINIFGSYNYLLLAVSEATLQALMHELSEVNAEN
SRNQIISMAQKYAEFAHAQRQCFKLVFELQLLDSEPLPESQGQLIAGLFRLIERELALLFPHKTAEQQLQMSRVLWGGIH
GLTALSLDNKLFADTASLPALLESHVTGYLQGMGYQREESCC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22746; Mature: 22615

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARRKEHSHDEIRAMAIEAAMALLQQQGTQELSLRKIASQIGYVPSTLINIFGSYNYLLL
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHEE
AVSEATLQALMHELSEVNAENSRNQIISMAQKYAEFAHAQRQCFKLVFELQLLDSEPLPE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SQGQLIAGLFRLIERELALLFPHKTAEQQLQMSRVLWGGIHGLTALSLDNKLFADTASLP
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ALLESHVTGYLQGMGYQREESCC
HHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ARRKEHSHDEIRAMAIEAAMALLQQQGTQELSLRKIASQIGYVPSTLINIFGSYNYLLL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHEE
AVSEATLQALMHELSEVNAENSRNQIISMAQKYAEFAHAQRQCFKLVFELQLLDSEPLPE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SQGQLIAGLFRLIERELALLFPHKTAEQQLQMSRVLWGGIHGLTALSLDNKLFADTASLP
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
ALLESHVTGYLQGMGYQREESCC
HHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA