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The map label for this gene is 117918622

Identifier: 117918622

GI number: 117918622

Start: 186990

End: 189002

Strand: Direct

Name: 117918622

Synonym: Shewana3_0164

Alternate gene names: NA

Gene position: 186990-189002 (Clockwise)

Preceding gene: 117918621

Following gene: 117918623

Centisome position: 3.76

GC content: 48.09

Gene sequence:

>2013_bases
ATGATGCCAAGATCAAAGCCTGATGCAGGGCAGCGCGAGGCGCTTTTGAGATTAAAGCTGTTTGCACAGGCGCTACTGCA
ATCTCACTCTGCGGGGGAGGCTAAGCGGCTTATCGATCCAATGCTGGCGCAGTTATGCCAATTGACAGGGTTGGAGCTGC
ACCCGGCGTTGTTTCTCGATACTGAGGCCAGCATGACCCCTTTTGGCAAGGCGGTATCTCCAACAACTGCGGCGCAATGT
GCAGAAGATCCCGAGCGTAGCAGAGTGTTTATTCAGGGAATTCATCAAGCGATACAGGACAAACTTAAAGCTAACTCGAA
CCAACCAGTGCACATACTCTATGCCGGAACCGGGCCTTTTGCTTGGTTAATTTTGGCCCTATTACCGCTATTTACGGCTA
AGCAAGTGCGAGTAACCATACTCGACATTCATCGAGCGTCATTGGAGAGTGTGGAAAAGCTACTGGCATATTTCGATGTA
GCGGATCGTGTCGATGCGCTTATCTGTGCTGACGCTACGCTTTGGCGGCCAGCATCAACACAAGCCTTTGATCTAATTAT
TTCTGAAACCATGAAACACCTGCTGCAACAGGAACCGCAGGTACAGATTTTTAGCCATCTACAGCATTTTTTAGCAGAGG
ATGGATGTTTGATCCCCGAGTCGATTGAGTTGGATGCGTGGCTCGAGCTAAAAGAGCAGCCGCCAATATATTTGGGCCCT
TTATTCTGTCTCGATTTAGCCCATGCCCGCTTGCTCGCTCAAGGTGACAGAAGTGGGTTAGCGGGGAGCTTATTGTTACC
CGATTATGATCCTCAACCCATAAACCTAAAATTGACGACAAAAATCAGGGTCTATGGCGAACACCAATTACTTGAAAATC
AATCACAATTAACCCTATCTCAATATAAAAAATCCCTGTGGCTTAAACCACTGAGTCGAGTGGACTTTAGCTACGAGCTG
GGAACCTATCCCGATTTTATCTTCCAATATCAGCAGCAGAAATTGCCACTTGTTGGCAGTGAGGATTTGAGTTGTTTGGG
GATTTATCACTTGCAGCGACTATGGCAAAAAATTCAGTTGCAAAAGCGTGGACAGGTCAATGAGGTTACTGAGAGAGAAT
GGAACCTAGATAAAGCGCTGCTGGATTTGTGCGGCATTGGATTAGAGCCTGGGATGAAGGCGCTCTATCAATATGATACA
CAGGCTGATTTTATCGCCTTCGTTCAAAGGCAAACTCAGCTGACTACAGCGGATATCGTTGGCATCAATCAGCGATTGCG
TGCCTTATCCCAAGCTGAGCCAGAAAGCGGCAATACAGAGCTAGCTTATGGTGCAGCTTTACCTCAAGTGCTTACCGACG
CCCAACTCTCCTCTTGGCAACGGGAAGGTTATATAGTCATCCCGCAAGTGTTGTCAAAAGCGCAATGTGCGGCGAGTCGA
GCCGTGATTTGGCAGCAGCTTGGCGCGAATGAAAATGATCCATCAACTTGGTACCAGTCCCATGAGTTGATGCAGAAAAT
CATGCTGCAGTTATTTCGTCATCCCATCCTCGATGCCAATCGGCAAACACCGCTAATCCGCCAAGTCTTTGAACAATTAT
GGCAGCGTACCGATTTAGTGATGACAACTGATAGAGTGAGTTTTAATCCTCCTGAAACGCCCACTTGGCAGTTTCCTGGC
CCCAATATGCATTGGGACATGCCACTGCAACTACCTGTGCCATTTGGGACTCAAGGATTGATTTATCTGACAGATACCCC
TGCCGAGCAGGGGGCATTTTGTTGTGTTCCCGGCTTTCACCTCAAAATAGAAACCTGGCTACAGGAACGAAACAAGACTG
ATATTGAGTTGCAGCAACAGCGTTGGGAGGAGTGGTCCATTAAACCCATTGCGGCAAATGCAGGGGATTTAATTATTTGG
CACCATGCATTGCCCCATGGACCGACGCCAAATCGAGGCCTGTTACCCCGCATGGTGCAGTACATTAACTTCTACCCAAT
GGCTAGCCAATGA

Upstream 100 bases:

>100_bases
AATGCCGACCAAACCCATTGGGTCGCGAACAAAGGTGTGGAGGCCAGAATCAATTTGGTGATCGACTGTGAAGTCAACTC
GTGGTTAAAGGAGCTTATCC

Downstream 100 bases:

>100_bases
TTGATATTCATGAACAGCAGCAACGCTATTGGCAATTGCTGCATCAGCCTGAATCATTGTTTTTACTGCATCAAGCGCAG
GATGTTGAGCATTTTATTAC

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: Phytanoyl-CoA Dioxygenase Family; Phytanoyl-CoA Dioxygenase Superfamily Protein; Phytanoyl-CoA Deoxygenase Family Protein; Phytanoyl-CoA Deoxygenase PhyH Family Protein

Number of amino acids: Translated: 670; Mature: 670

Protein sequence:

>670_residues
MMPRSKPDAGQREALLRLKLFAQALLQSHSAGEAKRLIDPMLAQLCQLTGLELHPALFLDTEASMTPFGKAVSPTTAAQC
AEDPERSRVFIQGIHQAIQDKLKANSNQPVHILYAGTGPFAWLILALLPLFTAKQVRVTILDIHRASLESVEKLLAYFDV
ADRVDALICADATLWRPASTQAFDLIISETMKHLLQQEPQVQIFSHLQHFLAEDGCLIPESIELDAWLELKEQPPIYLGP
LFCLDLAHARLLAQGDRSGLAGSLLLPDYDPQPINLKLTTKIRVYGEHQLLENQSQLTLSQYKKSLWLKPLSRVDFSYEL
GTYPDFIFQYQQQKLPLVGSEDLSCLGIYHLQRLWQKIQLQKRGQVNEVTEREWNLDKALLDLCGIGLEPGMKALYQYDT
QADFIAFVQRQTQLTTADIVGINQRLRALSQAEPESGNTELAYGAALPQVLTDAQLSSWQREGYIVIPQVLSKAQCAASR
AVIWQQLGANENDPSTWYQSHELMQKIMLQLFRHPILDANRQTPLIRQVFEQLWQRTDLVMTTDRVSFNPPETPTWQFPG
PNMHWDMPLQLPVPFGTQGLIYLTDTPAEQGAFCCVPGFHLKIETWLQERNKTDIELQQQRWEEWSIKPIAANAGDLIIW
HHALPHGPTPNRGLLPRMVQYINFYPMASQ

Sequences:

>Translated_670_residues
MMPRSKPDAGQREALLRLKLFAQALLQSHSAGEAKRLIDPMLAQLCQLTGLELHPALFLDTEASMTPFGKAVSPTTAAQC
AEDPERSRVFIQGIHQAIQDKLKANSNQPVHILYAGTGPFAWLILALLPLFTAKQVRVTILDIHRASLESVEKLLAYFDV
ADRVDALICADATLWRPASTQAFDLIISETMKHLLQQEPQVQIFSHLQHFLAEDGCLIPESIELDAWLELKEQPPIYLGP
LFCLDLAHARLLAQGDRSGLAGSLLLPDYDPQPINLKLTTKIRVYGEHQLLENQSQLTLSQYKKSLWLKPLSRVDFSYEL
GTYPDFIFQYQQQKLPLVGSEDLSCLGIYHLQRLWQKIQLQKRGQVNEVTEREWNLDKALLDLCGIGLEPGMKALYQYDT
QADFIAFVQRQTQLTTADIVGINQRLRALSQAEPESGNTELAYGAALPQVLTDAQLSSWQREGYIVIPQVLSKAQCAASR
AVIWQQLGANENDPSTWYQSHELMQKIMLQLFRHPILDANRQTPLIRQVFEQLWQRTDLVMTTDRVSFNPPETPTWQFPG
PNMHWDMPLQLPVPFGTQGLIYLTDTPAEQGAFCCVPGFHLKIETWLQERNKTDIELQQQRWEEWSIKPIAANAGDLIIW
HHALPHGPTPNRGLLPRMVQYINFYPMASQ
>Mature_670_residues
MMPRSKPDAGQREALLRLKLFAQALLQSHSAGEAKRLIDPMLAQLCQLTGLELHPALFLDTEASMTPFGKAVSPTTAAQC
AEDPERSRVFIQGIHQAIQDKLKANSNQPVHILYAGTGPFAWLILALLPLFTAKQVRVTILDIHRASLESVEKLLAYFDV
ADRVDALICADATLWRPASTQAFDLIISETMKHLLQQEPQVQIFSHLQHFLAEDGCLIPESIELDAWLELKEQPPIYLGP
LFCLDLAHARLLAQGDRSGLAGSLLLPDYDPQPINLKLTTKIRVYGEHQLLENQSQLTLSQYKKSLWLKPLSRVDFSYEL
GTYPDFIFQYQQQKLPLVGSEDLSCLGIYHLQRLWQKIQLQKRGQVNEVTEREWNLDKALLDLCGIGLEPGMKALYQYDT
QADFIAFVQRQTQLTTADIVGINQRLRALSQAEPESGNTELAYGAALPQVLTDAQLSSWQREGYIVIPQVLSKAQCAASR
AVIWQQLGANENDPSTWYQSHELMQKIMLQLFRHPILDANRQTPLIRQVFEQLWQRTDLVMTTDRVSFNPPETPTWQFPG
PNMHWDMPLQLPVPFGTQGLIYLTDTPAEQGAFCCVPGFHLKIETWLQERNKTDIELQQQRWEEWSIKPIAANAGDLIIW
HHALPHGPTPNRGLLPRMVQYINFYPMASQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76007; Mature: 76007

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPRSKPDAGQREALLRLKLFAQALLQSHSAGEAKRLIDPMLAQLCQLTGLELHPALFLD
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEE
TEASMTPFGKAVSPTTAAQCAEDPERSRVFIQGIHQAIQDKLKANSNQPVHILYAGTGPF
CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHH
AWLILALLPLFTAKQVRVTILDIHRASLESVEKLLAYFDVADRVDALICADATLWRPAST
HHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEHCCCCHHCCCCCC
QAFDLIISETMKHLLQQEPQVQIFSHLQHFLAEDGCLIPESIELDAWLELKEQPPIYLGP
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCCEEECH
LFCLDLAHARLLAQGDRSGLAGSLLLPDYDPQPINLKLTTKIRVYGEHQLLENQSQLTLS
HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEEEEEEEEEECHHHHCCHHHHHHH
QYKKSLWLKPLSRVDFSYELGTYPDFIFQYQQQKLPLVGSEDLSCLGIYHLQRLWQKIQL
HHHHHHHHCHHHHCCCCEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
QKRGQVNEVTEREWNLDKALLDLCGIGLEPGMKALYQYDTQADFIAFVQRQTQLTTADIV
HHCCCHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHH
GINQRLRALSQAEPESGNTELAYGAALPQVLTDAQLSSWQREGYIVIPQVLSKAQCAASR
HHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHH
AVIWQQLGANENDPSTWYQSHELMQKIMLQLFRHPILDANRQTPLIRQVFEQLWQRTDLV
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEE
MTTDRVSFNPPETPTWQFPGPNMHWDMPLQLPVPFGTQGLIYLTDTPAEQGAFCCVPGFH
EEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCCEEECCCCE
LKIETWLQERNKTDIELQQQRWEEWSIKPIAANAGDLIIWHHALPHGPTPNRGLLPRMVQ
EEHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHH
YINFYPMASQ
HHCCCCCCCC
>Mature Secondary Structure
MMPRSKPDAGQREALLRLKLFAQALLQSHSAGEAKRLIDPMLAQLCQLTGLELHPALFLD
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEE
TEASMTPFGKAVSPTTAAQCAEDPERSRVFIQGIHQAIQDKLKANSNQPVHILYAGTGPF
CCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHH
AWLILALLPLFTAKQVRVTILDIHRASLESVEKLLAYFDVADRVDALICADATLWRPAST
HHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHEEHCCCCHHCCCCCC
QAFDLIISETMKHLLQQEPQVQIFSHLQHFLAEDGCLIPESIELDAWLELKEQPPIYLGP
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEECCCCCEEECH
LFCLDLAHARLLAQGDRSGLAGSLLLPDYDPQPINLKLTTKIRVYGEHQLLENQSQLTLS
HHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCEEEEEEEEEEEEECHHHHCCHHHHHHH
QYKKSLWLKPLSRVDFSYELGTYPDFIFQYQQQKLPLVGSEDLSCLGIYHLQRLWQKIQL
HHHHHHHHCHHHHCCCCEECCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
QKRGQVNEVTEREWNLDKALLDLCGIGLEPGMKALYQYDTQADFIAFVQRQTQLTTADIV
HHCCCHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHH
GINQRLRALSQAEPESGNTELAYGAALPQVLTDAQLSSWQREGYIVIPQVLSKAQCAASR
HHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHH
AVIWQQLGANENDPSTWYQSHELMQKIMLQLFRHPILDANRQTPLIRQVFEQLWQRTDLV
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEE
MTTDRVSFNPPETPTWQFPGPNMHWDMPLQLPVPFGTQGLIYLTDTPAEQGAFCCVPGFH
EEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECCCCCCCCEEECCCCE
LKIETWLQERNKTDIELQQQRWEEWSIKPIAANAGDLIIWHHALPHGPTPNRGLLPRMVQ
EEHHHHHHHCCCCCCHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHH
YINFYPMASQ
HHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA