The gene/protein map for NC_008577 is currently unavailable.
Definition Shewanella sp. ANA-3 chromosome chromosome 1, complete sequence.
Accession NC_008577
Length 4,972,204

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The map label for this gene is exeM [H]

Identifier: 117918618

GI number: 117918618

Start: 184314

End: 184790

Strand: Direct

Name: exeM [H]

Synonym: Shewana3_0160

Alternate gene names: 117918618

Gene position: 184314-184790 (Clockwise)

Preceding gene: 117918617

Following gene: 117918619

Centisome position: 3.71

GC content: 50.52

Gene sequence:

>477_bases
ATGGATAATTTGCGGACTTGGTGGCAAGGGCTTGCATCGCGCGAGCAGCAAATCGTCGGCTTCGGCGCCGTTTTCTTAGT
GATCGGCGTGTTTTACTGGGGCATCTGGACACCCATTGCCAATGCCGAAGCCAATGCACTGCGCAACTTAACGGCGCAGC
AGCAGACTCTGACCTATGTAAAGCAAACGGCAAATAAAATCGCTGGCTTAAAACAAAGCGGCGCTAAGCCGACAATGTCA
GGCAGCTTAAGCTCGGTCGTTAACCAAACGGCGGGCACTTACGGATTAGTGATCACTCGCATGCAGCCCCAGGGCGATAA
AATACAAGTGTGGATGGATGATGTGCCATTCGATGCCTTACTGAATTATTTGAGTGACTTAGTGCAGAAAAAAGGCCTAT
CACTTGAGAGTGTTGATTTGGCAGAGGCCGACGCGCCTGGCTATGTCAAAGTAAGACGTATCCAACTAGCGCAATAG

Upstream 100 bases:

>100_bases
TTTAAAGAAATAGTCGGCCGTCGCTTCCAAATGGACGGCGGTACGATGAACAGCGGTGAAGATCAGGTCACCAGCACCTT
AACCTTGAGGAGCAAATAAG

Downstream 100 bases:

>100_bases
GTTAAGGTGTAGCTGTGAGTTTGATAAAAAAAATCATTATAGGTGTACTGGTTTATTTAGTGTTTTTGCTGGCGTTATTT
CCCGCCAGTGTCGCTGTGCG

Product: general secretion pathway M protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MDNLRTWWQGLASREQQIVGFGAVFLVIGVFYWGIWTPIANAEANALRNLTAQQQTLTYVKQTANKIAGLKQSGAKPTMS
GSLSSVVNQTAGTYGLVITRMQPQGDKIQVWMDDVPFDALLNYLSDLVQKKGLSLESVDLAEADAPGYVKVRRIQLAQ

Sequences:

>Translated_158_residues
MDNLRTWWQGLASREQQIVGFGAVFLVIGVFYWGIWTPIANAEANALRNLTAQQQTLTYVKQTANKIAGLKQSGAKPTMS
GSLSSVVNQTAGTYGLVITRMQPQGDKIQVWMDDVPFDALLNYLSDLVQKKGLSLESVDLAEADAPGYVKVRRIQLAQ
>Mature_158_residues
MDNLRTWWQGLASREQQIVGFGAVFLVIGVFYWGIWTPIANAEANALRNLTAQQQTLTYVKQTANKIAGLKQSGAKPTMS
GSLSSVVNQTAGTYGLVITRMQPQGDKIQVWMDDVPFDALLNYLSDLVQKKGLSLESVDLAEADAPGYVKVRRIQLAQ

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]

COG id: COG3149

COG function: function code U; Type II secretory pathway, component PulM

Gene ontology:

Cell location: Cell inner membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP M family [H]

Homologues:

Organism=Escherichia coli, GI1789339, Length=152, Percent_Identity=29.6052631578947, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007690
- InterPro:   IPR023229 [H]

Pfam domain/function: PF04612 GspM [H]

EC number: NA

Molecular weight: Translated: 17375; Mature: 17375

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLRTWWQGLASREQQIVGFGAVFLVIGVFYWGIWTPIANAEANALRNLTAQQQTLTYV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
KQTANKIAGLKQSGAKPTMSGSLSSVVNQTAGTYGLVITRMQPQGDKIQVWMDDVPFDAL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCHHHH
LNYLSDLVQKKGLSLESVDLAEADAPGYVKVRRIQLAQ
HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MDNLRTWWQGLASREQQIVGFGAVFLVIGVFYWGIWTPIANAEANALRNLTAQQQTLTYV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
KQTANKIAGLKQSGAKPTMSGSLSSVVNQTAGTYGLVITRMQPQGDKIQVWMDDVPFDAL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCEEEEEECCCCHHHH
LNYLSDLVQKKGLSLESVDLAEADAPGYVKVRRIQLAQ
HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8407845 [H]