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The map label for this gene is yedF [H]

Identifier: 117918568

GI number: 117918568

Start: 126844

End: 127077

Strand: Direct

Name: yedF [H]

Synonym: Shewana3_0110

Alternate gene names: 117918568

Gene position: 126844-127077 (Clockwise)

Preceding gene: 117918567

Following gene: 117918571

Centisome position: 2.55

GC content: 47.86

Gene sequence:

>234_bases
ATGAGTCAATATATTCCAGATTATCAACTCGATATGGTGGGCGAGCCGTGCCCTTACCCCGCAGTGGCAACCCTTGAGGC
CATGCCGACACTGAAGCCAGGGGAGATATTAGAAGTGATCAGTGACTGTCCGCAGTCAATCAATAATATTCCACTCGATG
CCAAGAATCATGGCTATAAAGTGCTAGAGATTGAACAGAACGGGCCAACGATTCGGTATCTGATCCAGCGTTAA

Upstream 100 bases:

>100_bases
TGCTGCTGGCGCTGTCGTTTGCGGCCATGTTGCTGTGGGAAAAACGTTTCTTTGCCCGTAAAGCGAAGCGGGATGAACAA
TTGATCGCGGAGGCGGCGTA

Downstream 100 bases:

>100_bases
TTGAGCTATCCGAATAGGGCTATTAAGACAAATAAAAAGCGCTGCATTGGCAGCGCTTTTTGATCTTAGCCTTGGCAATC
GGCAGGTAAATATTCGTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 77; Mature: 76

Protein sequence:

>77_residues
MSQYIPDYQLDMVGEPCPYPAVATLEAMPTLKPGEILEVISDCPQSINNIPLDAKNHGYKVLEIEQNGPTIRYLIQR

Sequences:

>Translated_77_residues
MSQYIPDYQLDMVGEPCPYPAVATLEAMPTLKPGEILEVISDCPQSINNIPLDAKNHGYKVLEIEQNGPTIRYLIQR
>Mature_76_residues
SQYIPDYQLDMVGEPCPYPAVATLEAMPTLKPGEILEVISDCPQSINNIPLDAKNHGYKVLEIEQNGPTIRYLIQR

Specific function: Unknown

COG id: COG0425

COG function: function code O; Predicted redox protein, regulator of disulfide bond formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0033 family [H]

Homologues:

Organism=Escherichia coli, GI1788239, Length=77, Percent_Identity=81.8181818181818, Blast_Score=137, Evalue=2e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001455 [H]

Pfam domain/function: PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 8645; Mature: 8514

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: PS01148 UPF0033

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQYIPDYQLDMVGEPCPYPAVATLEAMPTLKPGEILEVISDCPQSINNIPLDAKNHGYK
CCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEE
VLEIEQNGPTIRYLIQR
EEEECCCCCEEEEEECC
>Mature Secondary Structure 
SQYIPDYQLDMVGEPCPYPAVATLEAMPTLKPGEILEVISDCPQSINNIPLDAKNHGYK
CCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEE
VLEIEQNGPTIRYLIQR
EEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]