Definition | Borrelia afzelii PKo plasmid lp28, complete sequence. |
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Accession | NC_008568 |
Length | 28,533 |
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The map label for this gene is 117621825
Identifier: 117621825
GI number: 117621825
Start: 22828
End: 22908
Strand: Direct
Name: 117621825
Synonym: BAPKO_4525
Alternate gene names: NA
Gene position: 22828-22908 (Clockwise)
Preceding gene: 117621822
Following gene: 117621828
Centisome position: 80.01
GC content: 18.52
Gene sequence:
>81_bases ATGACATTCTTAACAAGAATTATTATAAATAGAATAATAATTCTTGTTATATTTCTAATTTTTGATTTTGGGGGTTTATA A
Upstream 100 bases:
>100_bases CGATATAAATTTTATACATATATAAAAATAACGCATTGAATAAAAAATACAAATAATCATAAAAATAATTGCAAATTAAG GGACATTTTTTTAAAAAAAA
Downstream 100 bases:
>100_bases GCTATTAGCTATTCTTAATAAATCGTCTTCTTTCATTATGTATGTTTCATGAGTATAAATCCTTGTATTACTGTCTGTTG TAGTAATAACAGGCGGGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 26; Mature: 25
Protein sequence:
>26_residues MTFLTRIIINRIIILVIFLIFDFGGL
Sequences:
>Translated_26_residues MTFLTRIIINRIIILVIFLIFDFGGL >Mature_25_residues TFLTRIIINRIIILVIFLIFDFGGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3053; Mature: 2922
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLTRIIINRIIILVIFLIFDFGGL CHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TFLTRIIINRIIILVIFLIFDFGGL HHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA