Definition | Borrelia afzelii PKo plasmid lp28, complete sequence. |
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Accession | NC_008568 |
Length | 28,533 |
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The map label for this gene is 117621821
Identifier: 117621821
GI number: 117621821
Start: 20238
End: 20570
Strand: Reverse
Name: 117621821
Synonym: BAPKO_4521
Alternate gene names: NA
Gene position: 20570-20238 (Counterclockwise)
Preceding gene: 117621823
Following gene: 117621817
Centisome position: 72.09
GC content: 27.63
Gene sequence:
>333_bases ATGGTAGTATTCAACAAAAAACAAATCAAATTAGAAATTCTTGTCTTTGCAATAGAAATAGTAAATAACCAATTTGGTCA ATATCCAATAGAAAATGTGCTTAAGCTATATAATTGTGGCCTTTCAAAAGCGAATCTAGCCCCCGTTAAACTGACAACAA TGAGAAAATACCTTAAAAAATTAAAAGAATTTCAAATCATAAATAAATGTTACACTAGAAAAACAACATATTGTGGATTT TTAGTCCATTATAAGCTTAATTACACCACCGAACAAGCTTGTGCTATAATAAGGTTATATATCTTTTATGAAATAAGTTC TTTAGCAGACTAA
Upstream 100 bases:
>100_bases TTTTATGAGTTTTTAAAAGAAAATGGAAAATAGGCCGTTTAAGACAATAAGGCGAGCTTTGGCGTTTAAACATAAATAAA ATACAGATAATTTATGGAAA
Downstream 100 bases:
>100_bases ACCAACTTGAAAACCGCAACTAATTTAAACTTGTTTTAATAAAAAATCCTAAATATTTTAAGCTATTTTAAAAGCTAACA TAATGTTAGCTTTTAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MVVFNKKQIKLEILVFAIEIVNNQFGQYPIENVLKLYNCGLSKANLAPVKLTTMRKYLKKLKEFQIINKCYTRKTTYCGF LVHYKLNYTTEQACAIIRLYIFYEISSLAD
Sequences:
>Translated_110_residues MVVFNKKQIKLEILVFAIEIVNNQFGQYPIENVLKLYNCGLSKANLAPVKLTTMRKYLKKLKEFQIINKCYTRKTTYCGF LVHYKLNYTTEQACAIIRLYIFYEISSLAD >Mature_110_residues MVVFNKKQIKLEILVFAIEIVNNQFGQYPIENVLKLYNCGLSKANLAPVKLTTMRKYLKKLKEFQIINKCYTRKTTYCGF LVHYKLNYTTEQACAIIRLYIFYEISSLAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12931; Mature: 12931
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVFNKKQIKLEILVFAIEIVNNQFGQYPIENVLKLYNCGLSKANLAPVKLTTMRKYLKK CEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH LKEFQIINKCYTRKTTYCGFLVHYKLNYTTEQACAIIRLYIFYEISSLAD HHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVVFNKKQIKLEILVFAIEIVNNQFGQYPIENVLKLYNCGLSKANLAPVKLTTMRKYLKK CEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH LKEFQIINKCYTRKTTYCGFLVHYKLNYTTEQACAIIRLYIFYEISSLAD HHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA