The gene/protein map for NC_008568 is currently unavailable.
Definition Borrelia afzelii PKo plasmid lp28, complete sequence.
Accession NC_008568
Length 28,533

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The map label for this gene is 117621821

Identifier: 117621821

GI number: 117621821

Start: 20238

End: 20570

Strand: Reverse

Name: 117621821

Synonym: BAPKO_4521

Alternate gene names: NA

Gene position: 20570-20238 (Counterclockwise)

Preceding gene: 117621823

Following gene: 117621817

Centisome position: 72.09

GC content: 27.63

Gene sequence:

>333_bases
ATGGTAGTATTCAACAAAAAACAAATCAAATTAGAAATTCTTGTCTTTGCAATAGAAATAGTAAATAACCAATTTGGTCA
ATATCCAATAGAAAATGTGCTTAAGCTATATAATTGTGGCCTTTCAAAAGCGAATCTAGCCCCCGTTAAACTGACAACAA
TGAGAAAATACCTTAAAAAATTAAAAGAATTTCAAATCATAAATAAATGTTACACTAGAAAAACAACATATTGTGGATTT
TTAGTCCATTATAAGCTTAATTACACCACCGAACAAGCTTGTGCTATAATAAGGTTATATATCTTTTATGAAATAAGTTC
TTTAGCAGACTAA

Upstream 100 bases:

>100_bases
TTTTATGAGTTTTTAAAAGAAAATGGAAAATAGGCCGTTTAAGACAATAAGGCGAGCTTTGGCGTTTAAACATAAATAAA
ATACAGATAATTTATGGAAA

Downstream 100 bases:

>100_bases
ACCAACTTGAAAACCGCAACTAATTTAAACTTGTTTTAATAAAAAATCCTAAATATTTTAAGCTATTTTAAAAGCTAACA
TAATGTTAGCTTTTAAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MVVFNKKQIKLEILVFAIEIVNNQFGQYPIENVLKLYNCGLSKANLAPVKLTTMRKYLKKLKEFQIINKCYTRKTTYCGF
LVHYKLNYTTEQACAIIRLYIFYEISSLAD

Sequences:

>Translated_110_residues
MVVFNKKQIKLEILVFAIEIVNNQFGQYPIENVLKLYNCGLSKANLAPVKLTTMRKYLKKLKEFQIINKCYTRKTTYCGF
LVHYKLNYTTEQACAIIRLYIFYEISSLAD
>Mature_110_residues
MVVFNKKQIKLEILVFAIEIVNNQFGQYPIENVLKLYNCGLSKANLAPVKLTTMRKYLKKLKEFQIINKCYTRKTTYCGF
LVHYKLNYTTEQACAIIRLYIFYEISSLAD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12931; Mature: 12931

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVFNKKQIKLEILVFAIEIVNNQFGQYPIENVLKLYNCGLSKANLAPVKLTTMRKYLKK
CEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LKEFQIINKCYTRKTTYCGFLVHYKLNYTTEQACAIIRLYIFYEISSLAD
HHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVVFNKKQIKLEILVFAIEIVNNQFGQYPIENVLKLYNCGLSKANLAPVKLTTMRKYLKK
CEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
LKEFQIINKCYTRKTTYCGFLVHYKLNYTTEQACAIIRLYIFYEISSLAD
HHHHHHHHHHHHCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA