Definition | Borrelia afzelii PKo plasmid lp60-2, complete sequence. |
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Accession | NC_008565 |
Length | 59,804 |
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The map label for this gene is 117621695
Identifier: 117621695
GI number: 117621695
Start: 48072
End: 48290
Strand: Direct
Name: 117621695
Synonym: BAPKO_2548
Alternate gene names: NA
Gene position: 48072-48290 (Clockwise)
Preceding gene: 117621694
Following gene: 117621699
Centisome position: 80.38
GC content: 33.33
Gene sequence:
>219_bases GTGGGTAAAGACTATAATGAGGAGAATTTTAATAAATTCTTTTTAGACTTAGGTTCTGAGCGATCTAAAGAACTGATTAA GTTGTTTGGTAGGATAAAAAATGATAGGAATGTATTTGAGAAGAAAGTTTCTCTGCTTTCTTATTGTATAAATGGGGGCG ATTCTAGGCCGCCTATTGACGCAATATTTGATGAAGAGGAGAAAGGAGTAATAAAATAG
Upstream 100 bases:
>100_bases AAAAAACCACAGTTCTTGCACCATTTCTTTTGAATTTATTTTTGACTTTAGGGATAGGATCCTTAGTTTAAAGGATGCTA ATTATCGCAATGTACCTCCA
Downstream 100 bases:
>100_bases ACTAAATGGAGCCAGTTTTGGTGGTTAAAGATATTTATATTTAAAACTCCTAGTCTTGAAGGTTAGTTTTTATACTAAAA AAATATAATATATATTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MGKDYNEENFNKFFLDLGSERSKELIKLFGRIKNDRNVFEKKVSLLSYCINGGDSRPPIDAIFDEEEKGVIK
Sequences:
>Translated_72_residues MGKDYNEENFNKFFLDLGSERSKELIKLFGRIKNDRNVFEKKVSLLSYCINGGDSRPPIDAIFDEEEKGVIK >Mature_71_residues GKDYNEENFNKFFLDLGSERSKELIKLFGRIKNDRNVFEKKVSLLSYCINGGDSRPPIDAIFDEEEKGVIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8347; Mature: 8215
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKDYNEENFNKFFLDLGSERSKELIKLFGRIKNDRNVFEKKVSLLSYCINGGDSRPPID CCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC AIFDEEEKGVIK CCCCCCCCCCCC >Mature Secondary Structure GKDYNEENFNKFFLDLGSERSKELIKLFGRIKNDRNVFEKKVSLLSYCINGGDSRPPID CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCC AIFDEEEKGVIK CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA