Definition | Borrelia afzelii PKo plasmid lp60-2, complete sequence. |
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Accession | NC_008565 |
Length | 59,804 |
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The map label for this gene is 117621676
Identifier: 117621676
GI number: 117621676
Start: 32875
End: 33033
Strand: Reverse
Name: 117621676
Synonym: BAPKO_2529
Alternate gene names: NA
Gene position: 33033-32875 (Counterclockwise)
Preceding gene: 117621679
Following gene: 117621674
Centisome position: 55.24
GC content: 27.67
Gene sequence:
>159_bases ATGTTTATTATTTATGTTGTTTTTGTACCAATAAGTTCTTGTAAAAATTACGCAAGCAGCAAAGATGTAAAAAATTTAGA GCAAGATTTTAGAAAACAAGCTTTTTTGGGGGTGGGTACAAAAGATGAAATAAAAAAAAATAATCCAGAGTGTTGTTGA
Upstream 100 bases:
>100_bases AATGCTAATCAAAAAAATATTTTTCAAAAGTATTTTTTTGGGTGTGTGTAAGATTTTTATGTAACAAAATGTTGAGTGAT GGGAGATATTATTATGAATA
Downstream 100 bases:
>100_bases ATATTTAGTATTAAAAAGGGATTGAAAAAAAATAAAAGAATGAAAGGATAAAATAGATGAAAAGATAAAGAAAAATTTAA AAATGAATTCAAGGAGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 52; Mature: 52
Protein sequence:
>52_residues MFIIYVVFVPISSCKNYASSKDVKNLEQDFRKQAFLGVGTKDEIKKNNPECC
Sequences:
>Translated_52_residues MFIIYVVFVPISSCKNYASSKDVKNLEQDFRKQAFLGVGTKDEIKKNNPECC >Mature_52_residues MFIIYVVFVPISSCKNYASSKDVKNLEQDFRKQAFLGVGTKDEIKKNNPECC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5947; Mature: 5947
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFIIYVVFVPISSCKNYASSKDVKNLEQDFRKQAFLGVGTKDEIKKNNPECC CEEEEEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCC >Mature Secondary Structure MFIIYVVFVPISSCKNYASSKDVKNLEQDFRKQAFLGVGTKDEIKKNNPECC CEEEEEEEECHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA