Definition | Borrelia afzelii PKo plasmid lp60-2, complete sequence. |
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Accession | NC_008565 |
Length | 59,804 |
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The map label for this gene is 117621647
Identifier: 117621647
GI number: 117621647
Start: 120
End: 683
Strand: Direct
Name: 117621647
Synonym: BAPKO_2500
Alternate gene names: NA
Gene position: 120-683 (Clockwise)
Preceding gene: NA
Following gene: 117621648
Centisome position: 0.2
GC content: 27.84
Gene sequence:
>564_bases TTGATTCCCTCTACTGATGAAGAAAAGAGAGCAGACGAAGCAATTAAAGATTTAGGAAATATTCTTGGAAACTCTAAATT TTCTGAATTAATTGAAGAAGCGCGTGCACTTAAAGATGAATATGCTTTAATAAAAGCTGATTTGCATGATGTGCTAGAAA AAATTCAAAATAAAAAAACACCACTAATGGGAAATTATAAGAATAATAGAGACAAGATAAATAAATTAGCAAAATTGGAG GAAGATAATTTAAAGATAGATTCTGAACTTGAGAAACTTATAAATAAGATTAATATTGCAGAAAATGAGATAATATCTGC TGCTTTATTTTTTGATAAGGCCAATAAAAGGTTAAAAGAAAGTATTATTAAAAGATTAGAGAGTAGAAATAAGAGATCTG ATGCATTAAAATTATCTAGACAGGCTCTAAGTGACGCAAGAAGTGCTTTAAGTAATTTAGAATCTTTTTTTTCTAACAGA ATTGAGGCAATAGGAAGAAAGAAAGAAATAAAAGAGCTTATTACACATGCAAAAACTATTGTAGCAAGTCTCAACAAAAA ATAA
Upstream 100 bases:
>100_bases TAATCCTGTAGCACCTTCAGTATCATTAAATAATAGGGTTAATATAGCAAATATTTCAATTGATGAGCATGCTCAAAAAA AAGAAATAAAAAAAGAGGAT
Downstream 100 bases:
>100_bases TAAAGAATTCTCCATTTATAATTTCTATGAAATTTAGGTGGAGATAAATTTTTAAAATCAGCTTAGAACATTCAAGTAAC TCAAATTATATTTTAGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: BBK01-Like Protein
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MIPSTDEEKRADEAIKDLGNILGNSKFSELIEEARALKDEYALIKADLHDVLEKIQNKKTPLMGNYKNNRDKINKLAKLE EDNLKIDSELEKLINKINIAENEIISAALFFDKANKRLKESIIKRLESRNKRSDALKLSRQALSDARSALSNLESFFSNR IEAIGRKKEIKELITHAKTIVASLNKK
Sequences:
>Translated_187_residues MIPSTDEEKRADEAIKDLGNILGNSKFSELIEEARALKDEYALIKADLHDVLEKIQNKKTPLMGNYKNNRDKINKLAKLE EDNLKIDSELEKLINKINIAENEIISAALFFDKANKRLKESIIKRLESRNKRSDALKLSRQALSDARSALSNLESFFSNR IEAIGRKKEIKELITHAKTIVASLNKK >Mature_187_residues MIPSTDEEKRADEAIKDLGNILGNSKFSELIEEARALKDEYALIKADLHDVLEKIQNKKTPLMGNYKNNRDKINKLAKLE EDNLKIDSELEKLINKINIAENEIISAALFFDKANKRLKESIIKRLESRNKRSDALKLSRQALSDARSALSNLESFFSNR IEAIGRKKEIKELITHAKTIVASLNKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21318; Mature: 21318
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPSTDEEKRADEAIKDLGNILGNSKFSELIEEARALKDEYALIKADLHDVLEKIQNKKT CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLMGNYKNNRDKINKLAKLEEDNLKIDSELEKLINKINIAENEIISAALFFDKANKRLKE CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIIKRLESRNKRSDALKLSRQALSDARSALSNLESFFSNRIEAIGRKKEIKELITHAKTI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VASLNKK HHHHCCC >Mature Secondary Structure MIPSTDEEKRADEAIKDLGNILGNSKFSELIEEARALKDEYALIKADLHDVLEKIQNKKT CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PLMGNYKNNRDKINKLAKLEEDNLKIDSELEKLINKINIAENEIISAALFFDKANKRLKE CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SIIKRLESRNKRSDALKLSRQALSDARSALSNLESFFSNRIEAIGRKKEIKELITHAKTI HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH VASLNKK HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA