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The map label for this gene is 116872388

Identifier: 116872388

GI number: 116872388

Start: 992023

End: 992877

Strand: Direct

Name: 116872388

Synonym: lwe0970

Alternate gene names: NA

Gene position: 992023-992877 (Clockwise)

Preceding gene: 116872387

Following gene: 116872389

Centisome position: 35.25

GC content: 36.37

Gene sequence:

>855_bases
ATGATTAGTCGTAATTTAAAAATTTACTTTCGTGATAGAACCGCTGTATTAATGTCGTTATTAACCGTTTTAATTATTAT
TGGACTTTATGCAATCTTTTTAGGAAATAATATGGAAGAGATGTTTAAACAGGCTTCTGGAAAAACGACAGGGGTAGAAG
AATTAGTAAATACTTGGGTGATTGCGGGAATTTTATCTATCACACCTGTCACAGTTTCGCTAGCTGTTTTTTCTTTGAAA
GTACATGATGAAGAGGAGAGTATTGCGAGAAGTTTTGCAATAACACCTGCTTCCAGATGGCGCATTGTGGTGAGCTATAT
TGTTAGTGGCTTGGTTGCCTCATTTGTCCTTTCACTTATAACTCTTTTTGTTGGAGAAATGTATATTTGGTTGACAGGAG
GAGCGATTTTACCGCTTGAAAGTTGGTTGGGTTTAATTAGTACGATGTTAATTAATGTCATTTGTTGTAGTAGTATCATG
TTTTTTATTACTAGTATGGTAAAACAAGCGAGCGCATTTAGTTCTGTTTCCACTATTGTTGGTACCGTTATTGGTTTTAT
TGCCGGGATTTATTTACCGATTGGTTCTCTTCCAGACACGGTGCAAACAATTATGAAGTGTTTTCCGTTTACATATGGAG
CATCCGCTATTCGTGAAATAATGACAAAAGCGCCTTTACAACAAGTTTTTGCGGGGAATTCAAATGCAATGAACGCCACA
AAAGAAATGATTGGTATTACCATTTATTGGGGCAATAAAACAGTGACGACGGGACTAAGTTTACTTATTTTAATTGCCTT
TGCAGTCGTGTTTGGGGTGTTATCGGTCCTCCTCATGAAACGACAAACTAAATAA

Upstream 100 bases:

>100_bases
TTGAATATATTGAATCAAGCGGCAGGTTTTTACAGTTCTTTTGAGGTGATTAAAGGAAATTTGGATGATGCATTTATCTC
AATGATTAAGGAGGATTCTA

Downstream 100 bases:

>100_bases
TTTTTGAATAAAAAAACAGCCGAAGTTCTCCTAATTATGCTATACTAATGGAATGTGAATGAATCTAGGAGGAAAATAAC
AATGAGTCAAGATTTGCAAA

Product: ABC transporter permease protein

Products: NA

Alternate protein names: ABC Transporter; ABC Transporter Integral Membrane Protein; ABC-2 Type Transporter; ABC-2 Type Transporter Superfamily; ABC-Type Multidrug Transport System Permease Component; ABC Transporter-Like Protein CylB; ABC Transporter Membrane Protein; ABC Transporter Permease; Membrane Permease; ABC Tranporter Permease; Drug ABC Exporter Membrane-Spanning Subunit; Multidrug ABC Transporter Permease; CylB Protein; Integral Membrane Protein; ABC-2 Type Transport System Permease Protein; ABC-Type Multidrug Transport System Protein; CylB Protein; ABC Transporter Permease Component

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MISRNLKIYFRDRTAVLMSLLTVLIIIGLYAIFLGNNMEEMFKQASGKTTGVEELVNTWVIAGILSITPVTVSLAVFSLK
VHDEEESIARSFAITPASRWRIVVSYIVSGLVASFVLSLITLFVGEMYIWLTGGAILPLESWLGLISTMLINVICCSSIM
FFITSMVKQASAFSSVSTIVGTVIGFIAGIYLPIGSLPDTVQTIMKCFPFTYGASAIREIMTKAPLQQVFAGNSNAMNAT
KEMIGITIYWGNKTVTTGLSLLILIAFAVVFGVLSVLLMKRQTK

Sequences:

>Translated_284_residues
MISRNLKIYFRDRTAVLMSLLTVLIIIGLYAIFLGNNMEEMFKQASGKTTGVEELVNTWVIAGILSITPVTVSLAVFSLK
VHDEEESIARSFAITPASRWRIVVSYIVSGLVASFVLSLITLFVGEMYIWLTGGAILPLESWLGLISTMLINVICCSSIM
FFITSMVKQASAFSSVSTIVGTVIGFIAGIYLPIGSLPDTVQTIMKCFPFTYGASAIREIMTKAPLQQVFAGNSNAMNAT
KEMIGITIYWGNKTVTTGLSLLILIAFAVVFGVLSVLLMKRQTK
>Mature_284_residues
MISRNLKIYFRDRTAVLMSLLTVLIIIGLYAIFLGNNMEEMFKQASGKTTGVEELVNTWVIAGILSITPVTVSLAVFSLK
VHDEEESIARSFAITPASRWRIVVSYIVSGLVASFVLSLITLFVGEMYIWLTGGAILPLESWLGLISTMLINVICCSSIM
FFITSMVKQASAFSSVSTIVGTVIGFIAGIYLPIGSLPDTVQTIMKCFPFTYGASAIREIMTKAPLQQVFAGNSNAMNAT
KEMIGITIYWGNKTVTTGLSLLILIAFAVVFGVLSVLLMKRQTK

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30942; Mature: 30942

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISRNLKIYFRDRTAVLMSLLTVLIIIGLYAIFLGNNMEEMFKQASGKTTGVEELVNTWV
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHH
IAGILSITPVTVSLAVFSLKVHDEEESIARSFAITPASRWRIVVSYIVSGLVASFVLSLI
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TLFVGEMYIWLTGGAILPLESWLGLISTMLINVICCSSIMFFITSMVKQASAFSSVSTIV
HHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTVIGFIAGIYLPIGSLPDTVQTIMKCFPFTYGASAIREIMTKAPLQQVFAGNSNAMNAT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
KEMIGITIYWGNKTVTTGLSLLILIAFAVVFGVLSVLLMKRQTK
HHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISRNLKIYFRDRTAVLMSLLTVLIIIGLYAIFLGNNMEEMFKQASGKTTGVEELVNTWV
CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHH
IAGILSITPVTVSLAVFSLKVHDEEESIARSFAITPASRWRIVVSYIVSGLVASFVLSLI
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TLFVGEMYIWLTGGAILPLESWLGLISTMLINVICCSSIMFFITSMVKQASAFSSVSTIV
HHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTVIGFIAGIYLPIGSLPDTVQTIMKCFPFTYGASAIREIMTKAPLQQVFAGNSNAMNAT
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH
KEMIGITIYWGNKTVTTGLSLLILIAFAVVFGVLSVLLMKRQTK
HHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA