Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
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Accession | NC_008555 |
Length | 2,814,130 |
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The map label for this gene is 116872306
Identifier: 116872306
GI number: 116872306
Start: 918368
End: 918748
Strand: Direct
Name: 116872306
Synonym: lwe0888
Alternate gene names: NA
Gene position: 918368-918748 (Clockwise)
Preceding gene: 116872305
Following gene: 116872307
Centisome position: 32.63
GC content: 33.6
Gene sequence:
>381_bases ATGGATTTAGTGAAAAATGGGAAAGTATTAGAACTTGTACATCCAAATGGAAACTGGACCTTAATTAAAGAAGAAGGTTT TTCTCCAGTTCAAATAACAGTGGCGGCGGTTGCAGCTTGTAGCGGATATGTATATCAAACATTACTTGAGAAAAAACGAA TTGAAATAAATGATTTAAGTATTCAAACGGACTATGAGCAAGATCAAGAAAGCGCTGTTCATGTTTTAACGAAAATTAAT GTTACTTTCACAGTTGATTTAGTAGATAAAAGTAACCAAGCAAAAGCGGAAAAAGCAGTGCATTTAGTGAAAGAGGCTTG CCCAGTTGCGAAAAGTTTAGATCCTTCGATTGAAATTAACGAGATTGTTGTTTTTAAATAA
Upstream 100 bases:
>100_bases ATTCTTTTTTTCGTACAGAAAGTTGGACATGGCTTTTTATTTGAGCTATAATCTTATTATTCATATAAGAATTGTAAGAA TTAAATTGGAGGAATGAATC
Downstream 100 bases:
>100_bases ATGTCTTATGGACCAAGCCGCGGCGCTTGGTCTTTTTTTTTACGCGTTTAGTTTGGCTTGATTACATAGAGGGAAGGCTA TATACTGAAACCAAACAATA
Product: OsmC family protein
Products: NA
Alternate protein names: OsmC/Ohr Family Protein; OsmC Family Protein
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MDLVKNGKVLELVHPNGNWTLIKEEGFSPVQITVAAVAACSGYVYQTLLEKKRIEINDLSIQTDYEQDQESAVHVLTKIN VTFTVDLVDKSNQAKAEKAVHLVKEACPVAKSLDPSIEINEIVVFK
Sequences:
>Translated_126_residues MDLVKNGKVLELVHPNGNWTLIKEEGFSPVQITVAAVAACSGYVYQTLLEKKRIEINDLSIQTDYEQDQESAVHVLTKIN VTFTVDLVDKSNQAKAEKAVHLVKEACPVAKSLDPSIEINEIVVFK >Mature_126_residues MDLVKNGKVLELVHPNGNWTLIKEEGFSPVQITVAAVAACSGYVYQTLLEKKRIEINDLSIQTDYEQDQESAVHVLTKIN VTFTVDLVDKSNQAKAEKAVHLVKEACPVAKSLDPSIEINEIVVFK
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13965; Mature: 13965
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLVKNGKVLELVHPNGNWTLIKEEGFSPVQITVAAVAACSGYVYQTLLEKKRIEINDLS CCCCCCCCEEEEEECCCCEEEEECCCCCCEEHHHHHHHHHCHHHHHHHHHHCCCEEEEEE IQTDYEQDQESAVHVLTKINVTFTVDLVDKSNQAKAEKAVHLVKEACPVAKSLDPSIEIN EEECCCCCHHHHEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEE EIVVFK EEEEEC >Mature Secondary Structure MDLVKNGKVLELVHPNGNWTLIKEEGFSPVQITVAAVAACSGYVYQTLLEKKRIEINDLS CCCCCCCCEEEEEECCCCEEEEECCCCCCEEHHHHHHHHHCHHHHHHHHHHCCCEEEEEE IQTDYEQDQESAVHVLTKINVTFTVDLVDKSNQAKAEKAVHLVKEACPVAKSLDPSIEIN EEECCCCCHHHHEEEEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEE EIVVFK EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA