| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872280
Identifier: 116872280
GI number: 116872280
Start: 895327
End: 895815
Strand: Direct
Name: 116872280
Synonym: lwe0860
Alternate gene names: NA
Gene position: 895327-895815 (Clockwise)
Preceding gene: 116872279
Following gene: 116872281
Centisome position: 31.82
GC content: 31.29
Gene sequence:
>489_bases ATGAAAATGAAAATTTTGACGGTCAATGCAATTATTGCCGCACTGTATGTGGTACTTGGAATGGTTGTGGCACCAATTAG CTTTATGGCATTACAATTTAGATTACCAGAAATCTTTAATCATCTAATCGTTTTTAATAAAAAATACTTTTGGGGTATTA TCATAGGTGTTTTTATTATGAATTTGTTCTTTTCTGGATTAGGGTGGATTGATTTGGTTTTTGGTGTGGGACAATCTGTT ATATCGCTGTTAATTATGATTGGTATTTCTAAATATGTTAAAGGAATTATTCCGCGGATGATTATTAATACAATTCTTTT TTCCATAACAATGGTGTTTATCGCATGGGAATTATTTCTCGCTTTAGACTATCCATTCCTGGAAACATGGTTATTCGCTT CTGCAAGTGAACTTATTGTAATGGGAATCGGGATTCCATTGATGTATATATTAAATAAACGTTTGAATTTCCGTAAAATG ATTGATTAA
Upstream 100 bases:
>100_bases TACATTAACTTCCAGATATGAGAAAATAGCATGTTGGCAAATTTTGTCACACGTGGTTCATTCATACCATCCCACGTAAA AAAACTAGGAGGAAATAATA
Downstream 100 bases:
>100_bases AAAACCGAAATTTTAATAAAGAAAAATAAATGACAGAGGTGTTTTTGGAACCTCTGTTTTTTTATAGATAGATTTAGAAA AATTAAATCCACCTGTATAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKMKILTVNAIIAALYVVLGMVVAPISFMALQFRLPEIFNHLIVFNKKYFWGIIIGVFIMNLFFSGLGWIDLVFGVGQSV ISLLIMIGISKYVKGIIPRMIINTILFSITMVFIAWELFLALDYPFLETWLFASASELIVMGIGIPLMYILNKRLNFRKM ID
Sequences:
>Translated_162_residues MKMKILTVNAIIAALYVVLGMVVAPISFMALQFRLPEIFNHLIVFNKKYFWGIIIGVFIMNLFFSGLGWIDLVFGVGQSV ISLLIMIGISKYVKGIIPRMIINTILFSITMVFIAWELFLALDYPFLETWLFASASELIVMGIGIPLMYILNKRLNFRKM ID >Mature_162_residues MKMKILTVNAIIAALYVVLGMVVAPISFMALQFRLPEIFNHLIVFNKKYFWGIIIGVFIMNLFFSGLGWIDLVFGVGQSV ISLLIMIGISKYVKGIIPRMIINTILFSITMVFIAWELFLALDYPFLETWLFASASELIVMGIGIPLMYILNKRLNFRKM ID
Specific function: Unknown
COG id: COG4708
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18508; Mature: 18508
Theoretical pI: Translated: 10.13; Mature: 10.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.8 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.8 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMKILTVNAIIAALYVVLGMVVAPISFMALQFRLPEIFNHLIVFNKKYFWGIIIGVFIM CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH NLFFSGLGWIDLVFGVGQSVISLLIMIGISKYVKGIIPRMIINTILFSITMVFIAWELFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALDYPFLETWLFASASELIVMGIGIPLMYILNKRLNFRKMID HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC >Mature Secondary Structure MKMKILTVNAIIAALYVVLGMVVAPISFMALQFRLPEIFNHLIVFNKKYFWGIIIGVFIM CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH NLFFSGLGWIDLVFGVGQSVISLLIMIGISKYVKGIIPRMIINTILFSITMVFIAWELFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALDYPFLETWLFASASELIVMGIGIPLMYILNKRLNFRKMID HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA