| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872244
Identifier: 116872244
GI number: 116872244
Start: 856162
End: 856791
Strand: Direct
Name: 116872244
Synonym: lwe0824
Alternate gene names: NA
Gene position: 856162-856791 (Clockwise)
Preceding gene: 116872243
Following gene: 116872245
Centisome position: 30.42
GC content: 26.03
Gene sequence:
>630_bases ATGAATACAAATACTATAAAAGATTTAATAATTAGTATAGAACAAAGACCAAAAATGTTTCTCAGAAATAAAACAATAGA CGCATTAAGTGATTTTTTAAATGGCTATTCGATGGGAAGTAGAGAAAAAATAATAAAAGGATATTCAATAGATTTCTGGT TTTTTCATGAGTATATAAAGGACTATTATAACTATAGTTCCTCTACCTCTGGATGGACTAATATGATACTTGAACATTGT TGTGATGATCAAGAAAAAGCCTTTCACGTTTTCTTTCAAAGATACCATGAGTTTATGGAAATCAGTGTAGAATCAGTCTT TAAAGCAAATTTGGATAAAAGTAATAGTGTATTTCATTTTGATATGGCAAAGGGAAAAAAACTTATAACAAATTTAGATT TACAACAGCTAGAACCAGTATACAAAAATCCAAAAAGCTATATAGTATTGCAACTATCTCTTGATAATGGTTTTATTTTG TTAATAGAATCAGATTATCTATTCTATCAAAAAAGAAAATTATTTAAAAATCTTTCAGAAATTAATCATGAAATTTTAAA CTTATTTGGTACAGCGCAACAACTTAAGCCAATTTCAATAGAGGTGTTAAATAATATTGAAATTTGTTAG
Upstream 100 bases:
>100_bases AATAATAGTGGCCATTGAATCGTTTATGCCATTAGACTATAATAATATTTGTAAACAAGAAGATAGTTTTAGCTATTTGA CTTGTAAAGGAGCTAACAAG
Downstream 100 bases:
>100_bases CTTATACAAAATAAATTTTTCGAAAAAGAAAAAAGGCCTACTGAACCCCATAAGTTAGACTAAAAAATCTAACTTTAGAG ACATATTTTATTGGCTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MNTNTIKDLIISIEQRPKMFLRNKTIDALSDFLNGYSMGSREKIIKGYSIDFWFFHEYIKDYYNYSSSTSGWTNMILEHC CDDQEKAFHVFFQRYHEFMEISVESVFKANLDKSNSVFHFDMAKGKKLITNLDLQQLEPVYKNPKSYIVLQLSLDNGFIL LIESDYLFYQKRKLFKNLSEINHEILNLFGTAQQLKPISIEVLNNIEIC
Sequences:
>Translated_209_residues MNTNTIKDLIISIEQRPKMFLRNKTIDALSDFLNGYSMGSREKIIKGYSIDFWFFHEYIKDYYNYSSSTSGWTNMILEHC CDDQEKAFHVFFQRYHEFMEISVESVFKANLDKSNSVFHFDMAKGKKLITNLDLQQLEPVYKNPKSYIVLQLSLDNGFIL LIESDYLFYQKRKLFKNLSEINHEILNLFGTAQQLKPISIEVLNNIEIC >Mature_209_residues MNTNTIKDLIISIEQRPKMFLRNKTIDALSDFLNGYSMGSREKIIKGYSIDFWFFHEYIKDYYNYSSSTSGWTNMILEHC CDDQEKAFHVFFQRYHEFMEISVESVFKANLDKSNSVFHFDMAKGKKLITNLDLQQLEPVYKNPKSYIVLQLSLDNGFIL LIESDYLFYQKRKLFKNLSEINHEILNLFGTAQQLKPISIEVLNNIEIC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24694; Mature: 24694
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTNTIKDLIISIEQRPKMFLRNKTIDALSDFLNGYSMGSREKIIKGYSIDFWFFHEYIK CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHH DYYNYSSSTSGWTNMILEHCCDDQEKAFHVFFQRYHEFMEISVESVFKANLDKSNSVFHF HHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE DMAKGKKLITNLDLQQLEPVYKNPKSYIVLQLSLDNGFILLIESDYLFYQKRKLFKNLSE ECCCCCHHHHCCCHHHCCHHHCCCCEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH INHEILNLFGTAQQLKPISIEVLNNIEIC HHHHHHHHHCCHHHCCCCEEEEECCCCCC >Mature Secondary Structure MNTNTIKDLIISIEQRPKMFLRNKTIDALSDFLNGYSMGSREKIIKGYSIDFWFFHEYIK CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHH DYYNYSSSTSGWTNMILEHCCDDQEKAFHVFFQRYHEFMEISVESVFKANLDKSNSVFHF HHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE DMAKGKKLITNLDLQQLEPVYKNPKSYIVLQLSLDNGFILLIESDYLFYQKRKLFKNLSE ECCCCCHHHHCCCHHHCCHHHCCCCEEEEEEEEECCCEEEEEECCHHHHHHHHHHHHHHH INHEILNLFGTAQQLKPISIEVLNNIEIC HHHHHHHHHCCHHHCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA