| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872213
Identifier: 116872213
GI number: 116872213
Start: 826005
End: 826400
Strand: Direct
Name: 116872213
Synonym: lwe0793
Alternate gene names: NA
Gene position: 826005-826400 (Clockwise)
Preceding gene: 116872212
Following gene: 116872214
Centisome position: 29.35
GC content: 31.06
Gene sequence:
>396_bases ATGAAAACAGAAATGGATTTCACCTATATCTTTATCTGCTATGTCTCTGTTACCCTTCAACGCCAAGCGACTGCTTTTTA TAAAAAACAGGGTAAATTATTTAGTTATGAGTCACTAGAATTTATTGAGTCAAAAGAAATGGAGGAAGCAATACAATACC AATATGGAAATAAGCAATTAACTCCCGAAAAACTAATTGAATTAGAATATAGAAACGAAAAAATTTATACTAGTTTAGCT TCATTAACAGAAGTAGAACAGTATATTTTAAAAGAAAAGCACGTGAAACAACGATCTGATGCATCAATTGGAAAAGACAT GCAAATTAGTGGACAAATGGTTTCTAGAAAAAAGCGTCAAGCGTATGCCAAACTGAAAAAGTTACTTTCATTGTAA
Upstream 100 bases:
>100_bases TTACCCAAGATGTTAAAGGAACGATCACTTCCAATAGAAAAAGCATATCGTGGTTATTGGCAATATCGTTTGTCAAAATT ATAAAGGGAGGATATACGGC
Downstream 100 bases:
>100_bases CAAAAGAACACCGCAATAAATCTCCACCTTGAACTTTTCAATCCCTTAAATTAAAAGTTAAGGTGGAGTGAATATGGAAA AGAAGAATTTAGTTCCGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MKTEMDFTYIFICYVSVTLQRQATAFYKKQGKLFSYESLEFIESKEMEEAIQYQYGNKQLTPEKLIELEYRNEKIYTSLA SLTEVEQYILKEKHVKQRSDASIGKDMQISGQMVSRKKRQAYAKLKKLLSL
Sequences:
>Translated_131_residues MKTEMDFTYIFICYVSVTLQRQATAFYKKQGKLFSYESLEFIESKEMEEAIQYQYGNKQLTPEKLIELEYRNEKIYTSLA SLTEVEQYILKEKHVKQRSDASIGKDMQISGQMVSRKKRQAYAKLKKLLSL >Mature_131_residues MKTEMDFTYIFICYVSVTLQRQATAFYKKQGKLFSYESLEFIESKEMEEAIQYQYGNKQLTPEKLIELEYRNEKIYTSLA SLTEVEQYILKEKHVKQRSDASIGKDMQISGQMVSRKKRQAYAKLKKLLSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15506; Mature: 15506
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTEMDFTYIFICYVSVTLQRQATAFYKKQGKLFSYESLEFIESKEMEEAIQYQYGNKQL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC TPEKLIELEYRNEKIYTSLASLTEVEQYILKEKHVKQRSDASIGKDMQISGQMVSRKKRQ CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH AYAKLKKLLSL HHHHHHHHHCC >Mature Secondary Structure MKTEMDFTYIFICYVSVTLQRQATAFYKKQGKLFSYESLEFIESKEMEEAIQYQYGNKQL CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC TPEKLIELEYRNEKIYTSLASLTEVEQYILKEKHVKQRSDASIGKDMQISGQMVSRKKRQ CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH AYAKLKKLLSL HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA