| Definition | Listeria welshimeri serovar 6b str. SLCC5334, complete genome. |
|---|---|
| Accession | NC_008555 |
| Length | 2,814,130 |
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The map label for this gene is 116872209
Identifier: 116872209
GI number: 116872209
Start: 821132
End: 821620
Strand: Direct
Name: 116872209
Synonym: lwe0789
Alternate gene names: NA
Gene position: 821132-821620 (Clockwise)
Preceding gene: 116872208
Following gene: 116872210
Centisome position: 29.18
GC content: 33.54
Gene sequence:
>489_bases ATGAAAAAAATTATTTTAAGTACAGTATTATGTGGTGGAATTCTAATGGGGATGATGAACGGTTTGACTGTTCAGGCAGC AGATACATTAAGCGGTAATACGGAAATTGGAGCAGAAGTTATCAAAGGTGATGTTTCTTTAACAATTGATGCAACTACTG ATTTTGGCAGTCAGCCTTTATCTGAAACGGTAGATTTTGGTTCAAAGGATATTAATTATACAGTAACAGACTATTCTGGA ACGACAAATGGTTATGAAATTAGTGCTAAATTAGCGGACGCAGATGGTAAACGTTCTTTGAAAATTGGAGAAGTAGAGCT TTCTGAGGAAGTAGTGCCTGTTGTGACAAAAGATGTAAATATTGTTGGTGAAAATTCTGACAAAGTTACGAGTACATTAG TTTACACCAATGTAACGAAAGTTCAAAAATATACATCTACTATTGAATGGAATTTAACTAAAGGATCATCAAAACAAATT TCAGAGTAA
Upstream 100 bases:
>100_bases TGATTTCAGCTGATGCAAAAGCTGGTTCTTATAGTGCAAGTTTGGAATGGAATTTGCAACCAAATATAAAAAATGAGATA AACGAATAGGAGAAAAGACA
Downstream 100 bases:
>100_bases ACGGTAGTAATTAAATTGTAGAGGCTGGAACAGAATCGTTTAGGCTCGAATAAATAAGCCAGCATTCATGAAAGTTGTTC TTCAAATTTTTGTGAATGCT
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MKKIILSTVLCGGILMGMMNGLTVQAADTLSGNTEIGAEVIKGDVSLTIDATTDFGSQPLSETVDFGSKDINYTVTDYSG TTNGYEISAKLADADGKRSLKIGEVELSEEVVPVVTKDVNIVGENSDKVTSTLVYTNVTKVQKYTSTIEWNLTKGSSKQI SE
Sequences:
>Translated_162_residues MKKIILSTVLCGGILMGMMNGLTVQAADTLSGNTEIGAEVIKGDVSLTIDATTDFGSQPLSETVDFGSKDINYTVTDYSG TTNGYEISAKLADADGKRSLKIGEVELSEEVVPVVTKDVNIVGENSDKVTSTLVYTNVTKVQKYTSTIEWNLTKGSSKQI SE >Mature_162_residues MKKIILSTVLCGGILMGMMNGLTVQAADTLSGNTEIGAEVIKGDVSLTIDATTDFGSQPLSETVDFGSKDINYTVTDYSG TTNGYEISAKLADADGKRSLKIGEVELSEEVVPVVTKDVNIVGENSDKVTSTLVYTNVTKVQKYTSTIEWNLTKGSSKQI SE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17241; Mature: 17241
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIILSTVLCGGILMGMMNGLTVQAADTLSGNTEIGAEVIKGDVSLTIDATTDFGSQPL CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCEEEEEEECCCCCCCCC SETVDFGSKDINYTVTDYSGTTNGYEISAKLADADGKRSLKIGEVELSEEVVPVVTKDVN HHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEEEECCEE IVGENSDKVTSTLVYTNVTKVQKYTSTIEWNLTKGSSKQISE EEECCCCCEEEEEEEECHHHHHHHHCEEEEEEECCCCCCCCC >Mature Secondary Structure MKKIILSTVLCGGILMGMMNGLTVQAADTLSGNTEIGAEVIKGDVSLTIDATTDFGSQPL CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEECCEEEEEEECCCCCCCCC SETVDFGSKDINYTVTDYSGTTNGYEISAKLADADGKRSLKIGEVELSEEVVPVVTKDVN HHHHCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEEEECCEE IVGENSDKVTSTLVYTNVTKVQKYTSTIEWNLTKGSSKQISE EEECCCCCEEEEEEEECHHHHHHHHCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA