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The map label for this gene is arnA [H]

Identifier: 116689882

GI number: 116689882

Start: 2066662

End: 2067609

Strand: Direct

Name: arnA [H]

Synonym: Bcen2424_1861

Alternate gene names: 116689882

Gene position: 2066662-2067609 (Clockwise)

Preceding gene: 116689881

Following gene: 116689883

Centisome position: 59.32

GC content: 70.04

Gene sequence:

>948_bases
ATGAAGCCGCGCGCGGTCGTCTTCGCGTATCACAACGTCGGCGTGCGGTGCCTGCAGGTGCTGCTCGCACGCGGCGTCGA
CGTCGCGCTGGTCGTCACGCACGAGGACAATCCGAACGAGAACATCTGGTTCGGCAGCGTCGCATCCGTCGCGGCCGAGC
ACGGCATTTCGGTGCTCACGCCGGCCGATCCCGCCGATCCGGCGCTGCGCCGCGCGGTGTCCGACGCGCAGCCCGATTTC
ATCTTCTCGTTCTACTACCGCCACATGCTGCCGGTGGACCTGCTCGCGATCGCGCCGCGCGGCGCGTACAACATGCACGG
TTCGCTGCTGCCGAAATACCGGGGTCGGGTACCGACCAACTGGGCCGTGCTGAACGGCGAGACCGAGACCGGCGCGACGC
TGCACGAGATGGCCGCCAAGCCCGACGCGGGCGCGATCATCGCCCAGACCGCGGTGCCGATCCTGCCGGACGACACGGCT
GCGCAGGTGTTCGACAAAGTCACGGTGGCTGCCGAGCAGACGCTGTGGCGCGTGCTGCCCGCGCTGCTCGCGGGCGAGGC
GCCGCACCTGCCGAACGATCTCGCGACCGGCAGCTACTACGGCGGGCGCAAGCCCGAGGACGGCCGCGTCGACTGGTCGA
AGCCGGCCGCGCAGGTCTACAACCTGGTGCGCGCGGTCGCGCCCCCGTATCCGGGCGCATTCACGGACGTCGACGGCGCG
CGCTTCGTGATCGCGCGGGCGCGCCTCGCGGCGCCCGGCAGCGCGGCAGCGGCCGCCGCGGCGGATTTGCCGCCCGGCCT
GCACGTAAGCGATAATGCGCTATTCGGCGTCTGCGGCGACAGCCGCGCCCTATCCATTCTCGAACTCCGGCAGCAGCGCG
ACGGCAGCGAAACCGTCGTGACGCCCGCGGAATTCGCGCAGTTCATTCATTCTTCCCGTCATTCATGA

Upstream 100 bases:

>100_bases
AGGTGCGCGCGCGTCCCCGCTACCTGATCCAGGCCGTGCTCGAGCAGCACGACGGCGTGCCGCCGGTGCCGGCCGCCGCG
AACCGCCCGGGAGCCGCGCA

Downstream 100 bases:

>100_bases
AAGCAAAAAAAGTCCTGATCCTGGGTGTGAACGGCTTCATCGGCCATCACCTGTCGAAACGCATTCTTGAAACCACCGAT
TGGGAAGTGTTCGGCATGGA

Product: putative formyltransferase

Products: NA

Alternate protein names: UDP-4-amino-4-deoxy-L-arabinose formyltransferase; ArnAFT; UDP-L-Ara4N formyltransferase; UDP-glucuronic acid oxidase, UDP-4-keto-hexauronic acid decarboxylating; ArnADH; UDP-GlcUA decarboxylase; UDP-glucuronic acid dehydrogenase [H]

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNPNENIWFGSVASVAAEHGISVLTPADPADPALRRAVSDAQPDF
IFSFYYRHMLPVDLLAIAPRGAYNMHGSLLPKYRGRVPTNWAVLNGETETGATLHEMAAKPDAGAIIAQTAVPILPDDTA
AQVFDKVTVAAEQTLWRVLPALLAGEAPHLPNDLATGSYYGGRKPEDGRVDWSKPAAQVYNLVRAVAPPYPGAFTDVDGA
RFVIARARLAAPGSAAAAAAADLPPGLHVSDNALFGVCGDSRALSILELRQQRDGSETVVTPAEFAQFIHSSRHS

Sequences:

>Translated_315_residues
MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNPNENIWFGSVASVAAEHGISVLTPADPADPALRRAVSDAQPDF
IFSFYYRHMLPVDLLAIAPRGAYNMHGSLLPKYRGRVPTNWAVLNGETETGATLHEMAAKPDAGAIIAQTAVPILPDDTA
AQVFDKVTVAAEQTLWRVLPALLAGEAPHLPNDLATGSYYGGRKPEDGRVDWSKPAAQVYNLVRAVAPPYPGAFTDVDGA
RFVIARARLAAPGSAAAAAAADLPPGLHVSDNALFGVCGDSRALSILELRQQRDGSETVVTPAEFAQFIHSSRHS
>Mature_315_residues
MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNPNENIWFGSVASVAAEHGISVLTPADPADPALRRAVSDAQPDF
IFSFYYRHMLPVDLLAIAPRGAYNMHGSLLPKYRGRVPTNWAVLNGETETGATLHEMAAKPDAGAIIAQTAVPILPDDTA
AQVFDKVTVAAEQTLWRVLPALLAGEAPHLPNDLATGSYYGGRKPEDGRVDWSKPAAQVYNLVRAVAPPYPGAFTDVDGA
RFVIARARLAAPGSAAAAAAADLPPGLHVSDNALFGVCGDSRALSILELRQQRDGSETVVTPAEFAQFIHSSRHS

Specific function: Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabin

COG id: COG0223

COG function: function code J; Methionyl-tRNA formyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the sugar epimerase family. UDP-glucuronic acid decarboxylase subfamily [H]

Homologues:

Organism=Homo sapiens, GI21614513, Length=242, Percent_Identity=23.5537190082645, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI238814322, Length=217, Percent_Identity=24.8847926267281, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI1788589, Length=304, Percent_Identity=41.7763157894737, Blast_Score=242, Evalue=3e-65,
Organism=Escherichia coli, GI1789683, Length=263, Percent_Identity=29.277566539924, Blast_Score=109, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI133930964, Length=289, Percent_Identity=22.8373702422145, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021168
- InterPro:   IPR001509
- InterPro:   IPR005793
- InterPro:   IPR002376
- InterPro:   IPR011034
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase; PF02911 Formyl_trans_C; PF00551 Formyl_trans_N [H]

EC number: =2.1.2.13; =1.1.1.305 [H]

Molecular weight: Translated: 33552; Mature: 33552

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNPNENIWFGSVASVAAEHGISVLT
CCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCCCEEECHHHHHHHHCCCEEEC
PADPADPALRRAVSDAQPDFIFSFYYRHMLPVDLLAIAPRGAYNMHGSLLPKYRGRVPTN
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHCCCCCCC
WAVLNGETETGATLHEMAAKPDAGAIIAQTAVPILPDDTAAQVFDKVTVAAEQTLWRVLP
EEEECCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALLAGEAPHLPNDLATGSYYGGRKPEDGRVDWSKPAAQVYNLVRAVAPPYPGAFTDVDGA
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
RFVIARARLAAPGSAAAAAAADLPPGLHVSDNALFGVCGDSRALSILELRQQRDGSETVV
EEEEEHHHHCCCCCHHHHHHHCCCCCCEECCCCEEEECCCCHHHHHHHHHHHCCCCCEEE
TPAEFAQFIHSSRHS
CHHHHHHHHHHCCCC
>Mature Secondary Structure
MKPRAVVFAYHNVGVRCLQVLLARGVDVALVVTHEDNPNENIWFGSVASVAAEHGISVLT
CCCCEEEEEECCCCHHHHHHHHHCCCCEEEEEEECCCCCCCEEECHHHHHHHHCCCEEEC
PADPADPALRRAVSDAQPDFIFSFYYRHMLPVDLLAIAPRGAYNMHGSLLPKYRGRVPTN
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCHHHCCCCCCC
WAVLNGETETGATLHEMAAKPDAGAIIAQTAVPILPDDTAAQVFDKVTVAAEQTLWRVLP
EEEECCCCCCCCHHHHHHCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
ALLAGEAPHLPNDLATGSYYGGRKPEDGRVDWSKPAAQVYNLVRAVAPPYPGAFTDVDGA
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
RFVIARARLAAPGSAAAAAAADLPPGLHVSDNALFGVCGDSRALSILELRQQRDGSETVV
EEEEEHHHHCCCCCHHHHHHHCCCCCCEECCCCEEEECCCCHHHHHHHHHHHCCCCCEEE
TPAEFAQFIHSSRHS
CHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA