Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is mtfA [H]
Identifier: 116689853
GI number: 116689853
Start: 2035366
End: 2036199
Strand: Direct
Name: mtfA [H]
Synonym: Bcen2424_1832
Alternate gene names: 116689853
Gene position: 2035366-2036199 (Clockwise)
Preceding gene: 116689852
Following gene: 116689854
Centisome position: 58.42
GC content: 67.75
Gene sequence:
>834_bases ATGCTTTCGAAACTGACCCGCTGGTTCGACGATCGCCGCCGCGACCGCGCGCTGCGCAGCCATCCGGTTCCCGACGCGCT GTGGCAGGAAACCGTCGAGCGCCTGCCGTTCCTCGCCGCCCTGCCGCCTGACGCGCTCGCCAGGCTGCGCGAGCTGACGA GCCTGTTCGTCGCGAAAAAATCGTTTTCGACCGCGCACGGGCTCGAACTGACCGACGCGATGATCGTCGCGATCGCCGCG CAGGCCTGCCTGCCCGTGCTGAATCTCGATTTGTCGCTGTACGACGGCTGGGTGGGCGTCGTCGTGTATCCGGGCGAATT CGTGATCCGCAAGACGGTGCAGGACGAGGACGGCGTCGTCCACGAAGTCGAGCAGGATGCGAGCGGCGAGGCATGGGAAG GCGGCCCCGTGATCCTGTCGTGGGAAGACGCGCAGATGACGGACGGCCGGGACGCGTACAACGTCGTGATCCACGAGTTC GCGCACAAGATCGACATGGTCAACGGCGCGGCCGACGGCTATCCGCCCCTGTTTCGCCGCTGGCATGCGCCGCACCTCGA CGCGCAGGCGTGGGCCGACGTGTTCGAACATGCGTACGACCAGTTCTGCGCGCGCGTCGACGCGGTGCCGGATCGCGCAT GGGCGCGCTTCGAGCGGGACTCGCTGATCGATCCCTATGCGGCCGATCACCCGTCGGAATTCTTCGCGGTGTGCAGCGAG GCGCTGTTCGTCCGGCCGAAAGCGTTCGAGTCCGAATTTCCGGAGCTGTACCGGCTGCTGGCGCGCTACTACCGGCAGGA CCCGGCCGGCACCGGGGCCCTCGACGCGCCGTGA
Upstream 100 bases:
>100_bases TCCTCGCGGGCGTCGCGCTCGTCGGCGGTCTCTTCGCGGCATGGCAAAAACAGATCGATTGAGTTAAAAGACAGGCTTTG GATTTTCGTCCGCCGCCTCC
Downstream 100 bases:
>100_bases AAATTATTCGTCAACCGTCTGATTTTCTGGCATAATCGCCGTTTTTCGACCTTAGGCAAGTGGCTCGCGCCGGGCTTGGC GTCGGCCGAATCGCTCCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: Mlc titration factor A [H]
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MLSKLTRWFDDRRRDRALRSHPVPDALWQETVERLPFLAALPPDALARLRELTSLFVAKKSFSTAHGLELTDAMIVAIAA QACLPVLNLDLSLYDGWVGVVVYPGEFVIRKTVQDEDGVVHEVEQDASGEAWEGGPVILSWEDAQMTDGRDAYNVVIHEF AHKIDMVNGAADGYPPLFRRWHAPHLDAQAWADVFEHAYDQFCARVDAVPDRAWARFERDSLIDPYAADHPSEFFAVCSE ALFVRPKAFESEFPELYRLLARYYRQDPAGTGALDAP
Sequences:
>Translated_277_residues MLSKLTRWFDDRRRDRALRSHPVPDALWQETVERLPFLAALPPDALARLRELTSLFVAKKSFSTAHGLELTDAMIVAIAA QACLPVLNLDLSLYDGWVGVVVYPGEFVIRKTVQDEDGVVHEVEQDASGEAWEGGPVILSWEDAQMTDGRDAYNVVIHEF AHKIDMVNGAADGYPPLFRRWHAPHLDAQAWADVFEHAYDQFCARVDAVPDRAWARFERDSLIDPYAADHPSEFFAVCSE ALFVRPKAFESEFPELYRLLARYYRQDPAGTGALDAP >Mature_277_residues MLSKLTRWFDDRRRDRALRSHPVPDALWQETVERLPFLAALPPDALARLRELTSLFVAKKSFSTAHGLELTDAMIVAIAA QACLPVLNLDLSLYDGWVGVVVYPGEFVIRKTVQDEDGVVHEVEQDASGEAWEGGPVILSWEDAQMTDGRDAYNVVIHEF AHKIDMVNGAADGYPPLFRRWHAPHLDAQAWADVFEHAYDQFCARVDAVPDRAWARFERDSLIDPYAADHPSEFFAVCSE ALFVRPKAFESEFPELYRLLARYYRQDPAGTGALDAP
Specific function: Involved in the regulation of ptsG expression by binding and inactivating mlc [H]
COG id: COG3228
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mtfA family [H]
Homologues:
Organism=Escherichia coli, GI87082014, Length=242, Percent_Identity=33.8842975206612, Blast_Score=136, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010384 [H]
Pfam domain/function: PF06167 DUF980 [H]
EC number: NA
Molecular weight: Translated: 31286; Mature: 31286
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSKLTRWFDDRRRDRALRSHPVPDALWQETVERLPFLAALPPDALARLRELTSLFVAKK CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH SFSTAHGLELTDAMIVAIAAQACLPVLNLDLSLYDGWVGVVVYPGEFVIRKTVQDEDGVV HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEECCCEEEEECCCCCCCHH HEVEQDASGEAWEGGPVILSWEDAQMTDGRDAYNVVIHEFAHKIDMVNGAADGYPPLFRR HHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH WHAPHLDAQAWADVFEHAYDQFCARVDAVPDRAWARFERDSLIDPYAADHPSEFFAVCSE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH ALFVRPKAFESEFPELYRLLARYYRQDPAGTGALDAP HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLSKLTRWFDDRRRDRALRSHPVPDALWQETVERLPFLAALPPDALARLRELTSLFVAKK CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH SFSTAHGLELTDAMIVAIAAQACLPVLNLDLSLYDGWVGVVVYPGEFVIRKTVQDEDGVV HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEEECCCEEEEECCCCCCCHH HEVEQDASGEAWEGGPVILSWEDAQMTDGRDAYNVVIHEFAHKIDMVNGAADGYPPLFRR HHHHHCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH WHAPHLDAQAWADVFEHAYDQFCARVDAVPDRAWARFERDSLIDPYAADHPSEFFAVCSE CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH ALFVRPKAFESEFPELYRLLARYYRQDPAGTGALDAP HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA