Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is purA1 [H]
Identifier: 116689822
GI number: 116689822
Start: 2001905
End: 2003251
Strand: Reverse
Name: purA1 [H]
Synonym: Bcen2424_1801
Alternate gene names: 116689822
Gene position: 2003251-2001905 (Counterclockwise)
Preceding gene: 116689823
Following gene: 116689821
Centisome position: 57.5
GC content: 65.78
Gene sequence:
>1347_bases ATGTCTGCCAGCGCAGTGAACGTGACTCCCGGGCGCAATGTCGTCGTCGTGGGAACGCAATGGGGTGATGAAGGCAAGGG CAAGATCGTCGACTGGCTGACGGACCACGCTCAGGGCGTCGTGCGTTTCCAGGGCGGTCACAACGCCGGCCACACCCTCA TCATCGGCGGCAAGAAAACGATCTTGCGCCTCATTCCGTCGGGCATCATGCGTGAAGGCGTCGCCTGCTACATCGGCAAC GGCGTCGTTCTGTCCCCCGAAGCACTGTTCAAGGAAATCGGCGAGCTCGAAGAAGCCGGCGTGAACGTGCGCGACCGTCT GTTCATCTCCGAAGCCACGACGCTGATCCTGCCGTACCACATCGCGATCGACCAGGCGCGCGAAGCGCGCAAGGGCGCGG GCAAGATCGGCACGACGGGCCGCGGCATCGGCCCTGCGTACGAAGACAAGGTCGGCCGCCGCGCGCTGCGCGTGCAGGAC CTGTTCGACGCGAAGACCTTCGCCGATCGCCTGCGCGAAAATCTCGATTACCACAACTTCGTGCTGACCCAGTATCTGGG CGGCGCGGCCGTCGACTTCCAGGCCACGCTCGATACGATGCTCGGCTATGCCGACCGCCTGAAGCCGATGGTGGCCGACG TGTCGCGCCGCCTGTACGACGCGAACAATGCGGGCCAGAACCTGCTGTTCGAAGGTGCGCAAGGCACGCTGCTCGACATC GACCACGGCACCTATCCGTTCGTCACGTCGAGCAACTGCGTCGCCGGTGCGGCGTCGGCTGGCGCGGGCGTCGGTCCGCA GAAGCTCAACTACATTCTGGGCATCACGAAGGCGTATTGCACGCGCGTCGGCTCGGGCCCGTTCCCGAGCGAGCTGTACG ATGCGGACAACCCGCAGCGCCAGGACCAGATCGGCGTCACGCTCGCGAACGTCGGCAAGGAATTCGGCTCGGTCACCGGC CGTCCGCGCCGCACCGGCTGGCTCGATGCGGCTGCGCTGCGCCGCTCGATCCAGATCAACGGCGTGTCGGGCCTGTGCAT GACGAAGCTCGACGTGCTCGACGGCCTCGACGAAGTGAAGCTGTGCGTCGGCTACAAGGTCGACGGCAAGGACGTGGACA TCCTGCCGCGTGGCGCGGTCGATGTCGCGCGTTGCGAACCGGTGTACGAGACGTTCGCCGGCTGGAAGGAAAGCACGGTC GGGATCAACACGTGGGACGCACTGCCGGCGAACGCGCAGGCCTACCTCGCACGCGTCCAGGAAGTGGCTGGCGTGCCGGT CGACATGGTGTCGACGGGCCCGGACCGCGACGAAACGATCCTGCTCCGCCATCCGTTCAAGGTGTAA
Upstream 100 bases:
>100_bases GGCCGTGCTTCGGCGTGCATATCGTTGAAGCGAAACGGAAAAATTCGGAATCGCCCGCGAACATAGGTAGAATACGTTTT TAACCAGCTAACGAATCAAC
Downstream 100 bases:
>100_bases TTCCGAGATGACGCAGCAAATCACGATGACGGCGGCAGACTTGATGACCGATCCGCGCAACGACGACAAGAACCTGTGGG TAGGCTGGGACGAGTATCAT
Product: adenylosuccinate synthetase
Products: NA
Alternate protein names: AMPSase 1; AdSS 1; IMP--aspartate ligase 1 [H]
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MSASAVNVTPGRNVVVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLIIGGKKTILRLIPSGIMREGVACYIGN GVVLSPEALFKEIGELEEAGVNVRDRLFISEATTLILPYHIAIDQAREARKGAGKIGTTGRGIGPAYEDKVGRRALRVQD LFDAKTFADRLRENLDYHNFVLTQYLGGAAVDFQATLDTMLGYADRLKPMVADVSRRLYDANNAGQNLLFEGAQGTLLDI DHGTYPFVTSSNCVAGAASAGAGVGPQKLNYILGITKAYCTRVGSGPFPSELYDADNPQRQDQIGVTLANVGKEFGSVTG RPRRTGWLDAAALRRSIQINGVSGLCMTKLDVLDGLDEVKLCVGYKVDGKDVDILPRGAVDVARCEPVYETFAGWKESTV GINTWDALPANAQAYLARVQEVAGVPVDMVSTGPDRDETILLRHPFKV
Sequences:
>Translated_448_residues MSASAVNVTPGRNVVVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLIIGGKKTILRLIPSGIMREGVACYIGN GVVLSPEALFKEIGELEEAGVNVRDRLFISEATTLILPYHIAIDQAREARKGAGKIGTTGRGIGPAYEDKVGRRALRVQD LFDAKTFADRLRENLDYHNFVLTQYLGGAAVDFQATLDTMLGYADRLKPMVADVSRRLYDANNAGQNLLFEGAQGTLLDI DHGTYPFVTSSNCVAGAASAGAGVGPQKLNYILGITKAYCTRVGSGPFPSELYDADNPQRQDQIGVTLANVGKEFGSVTG RPRRTGWLDAAALRRSIQINGVSGLCMTKLDVLDGLDEVKLCVGYKVDGKDVDILPRGAVDVARCEPVYETFAGWKESTV GINTWDALPANAQAYLARVQEVAGVPVDMVSTGPDRDETILLRHPFKV >Mature_447_residues SASAVNVTPGRNVVVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLIIGGKKTILRLIPSGIMREGVACYIGNG VVLSPEALFKEIGELEEAGVNVRDRLFISEATTLILPYHIAIDQAREARKGAGKIGTTGRGIGPAYEDKVGRRALRVQDL FDAKTFADRLRENLDYHNFVLTQYLGGAAVDFQATLDTMLGYADRLKPMVADVSRRLYDANNAGQNLLFEGAQGTLLDID HGTYPFVTSSNCVAGAASAGAGVGPQKLNYILGITKAYCTRVGSGPFPSELYDADNPQRQDQIGVTLANVGKEFGSVTGR PRRTGWLDAAALRRSIQINGVSGLCMTKLDVLDGLDEVKLCVGYKVDGKDVDILPRGAVDVARCEPVYETFAGWKESTVG INTWDALPANAQAYLARVQEVAGVPVDMVSTGPDRDETILLRHPFKV
Specific function: Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first commited step in the biosynthesis of AMP from IMP [H]
COG id: COG0104
COG function: function code F; Adenylosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylosuccinate synthetase family [H]
Homologues:
Organism=Homo sapiens, GI22748717, Length=440, Percent_Identity=42.2727272727273, Blast_Score=325, Evalue=6e-89, Organism=Homo sapiens, GI34577063, Length=443, Percent_Identity=39.2776523702032, Blast_Score=304, Evalue=1e-82, Organism=Homo sapiens, GI40316944, Length=405, Percent_Identity=40.9876543209877, Blast_Score=289, Evalue=4e-78, Organism=Escherichia coli, GI1790620, Length=437, Percent_Identity=60.1830663615561, Blast_Score=539, Evalue=1e-154, Organism=Caenorhabditis elegans, GI25146553, Length=436, Percent_Identity=39.6788990825688, Blast_Score=307, Evalue=6e-84, Organism=Caenorhabditis elegans, GI25146555, Length=436, Percent_Identity=39.6788990825688, Blast_Score=307, Evalue=7e-84, Organism=Saccharomyces cerevisiae, GI6324109, Length=437, Percent_Identity=40.045766590389, Blast_Score=317, Evalue=2e-87, Organism=Drosophila melanogaster, GI21356033, Length=456, Percent_Identity=39.0350877192982, Blast_Score=313, Evalue=2e-85,
Paralogues:
None
Copy number: 940 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018220 - InterPro: IPR001114 [H]
Pfam domain/function: PF00709 Adenylsucc_synt [H]
EC number: =6.3.4.4 [H]
Molecular weight: Translated: 48147; Mature: 48016
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS01266 ADENYLOSUCCIN_SYN_1 ; PS00513 ADENYLOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASAVNVTPGRNVVVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLIIGGKKT CCCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCEEEECCHHH ILRLIPSGIMREGVACYIGNGVVLSPEALFKEIGELEEAGVNVRDRLFISEATTLILPYH HHHHHHHHHHHCCCEEEECCCEEECHHHHHHHHHHHHHCCCCHHHEEEEECCCEEEEEEH IAIDQAREARKGAGKIGTTGRGIGPAYEDKVGRRALRVQDLFDAKTFADRLRENLDYHNF HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH VLTQYLGGAAVDFQATLDTMLGYADRLKPMVADVSRRLYDANNAGQNLLFEGAQGTLLDI HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEC DHGTYPFVTSSNCVAGAASAGAGVGPQKLNYILGITKAYCTRVGSGPFPSELYDADNPQR CCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC QDQIGVTLANVGKEFGSVTGRPRRTGWLDAAALRRSIQINGVSGLCMTKLDVLDGLDEVK HHHHCEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCEE LCVGYKVDGKDVDILPRGAVDVARCEPVYETFAGWKESTVGINTWDALPANAQAYLARVQ EEEEEEECCCCCEECCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH EVAGVPVDMVSTGPDRDETILLRHPFKV HHHCCCEEEECCCCCCCCEEEEECCCCC >Mature Secondary Structure SASAVNVTPGRNVVVVGTQWGDEGKGKIVDWLTDHAQGVVRFQGGHNAGHTLIIGGKKT CCCEEEECCCCCEEEEEECCCCCCCCCCHHHHHHCCCEEEEEECCCCCCCEEEECCHHH ILRLIPSGIMREGVACYIGNGVVLSPEALFKEIGELEEAGVNVRDRLFISEATTLILPYH HHHHHHHHHHHCCCEEEECCCEEECHHHHHHHHHHHHHCCCCHHHEEEEECCCEEEEEEH IAIDQAREARKGAGKIGTTGRGIGPAYEDKVGRRALRVQDLFDAKTFADRLRENLDYHNF HHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH VLTQYLGGAAVDFQATLDTMLGYADRLKPMVADVSRRLYDANNAGQNLLFEGAQGTLLDI HHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEC DHGTYPFVTSSNCVAGAASAGAGVGPQKLNYILGITKAYCTRVGSGPFPSELYDADNPQR CCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCCC QDQIGVTLANVGKEFGSVTGRPRRTGWLDAAALRRSIQINGVSGLCMTKLDVLDGLDEVK HHHHCEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCEE LCVGYKVDGKDVDILPRGAVDVARCEPVYETFAGWKESTVGINTWDALPANAQAYLARVQ EEEEEEECCCCCEECCCCCCCHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH EVAGVPVDMVSTGPDRDETILLRHPFKV HHHCCCEEEECCCCCCCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA