The gene/protein map for NC_008542 is currently unavailable.
Definition Burkholderia cenocepacia HI2424 chromosome 1, complete sequence.
Accession NC_008542
Length 3,483,902

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The map label for this gene is yojK [H]

Identifier: 116689786

GI number: 116689786

Start: 1961502

End: 1962710

Strand: Reverse

Name: yojK [H]

Synonym: Bcen2424_1765

Alternate gene names: 116689786

Gene position: 1962710-1961502 (Counterclockwise)

Preceding gene: 116689787

Following gene: 116689784

Centisome position: 56.34

GC content: 69.73

Gene sequence:

>1209_bases
ATGAAACGCATCCTGTTCTGCGTGGTGCCCGAGAAGGGCCACGTCAATCCGTGCATCGGCCCGGCCCAGCATCTGCGCGC
AGCCGGCTGCGACGTCGCGTTCTATGCGCCGGCCGACATCAGCGAACAGCTCGACGGCGCCGGCGACTTCGCGTTCGTCG
GGCCGCGCGAGACGCCCGAGCGCCACGACCTGTCGCGCGGCGCGAGTTTCGCCGCGAACATTCGCGACGCCGACTGGCTG
CGGCACTGGATCCGCACGTTGCTGATCGACCTCGCGCCCGCGCAGGTGGACGGCATCCGAACAGTGCTGCGCGACTGGCG
GCCTGACGTGGTCGTGATCGACCCGCTGCTCTATGCGGCGGCGATCGCGGCCGAGCTGGAAGGGCTGCCGTGGGTCTCGA
TGTCCAATTCGCTGAATCCGGTGCTGCCGGACGATCTCGATTCGGAACTGCTGCGCACGGTGCGCTGGCTCGAACCGGAA
CGCACGCGGCTGTTCGCGCGCTACGGCCTCGACGCGCGCTTTCGCGGTTGCGACGTGCTGTCGCCGCACCTGACGCTCGC
GTTCACGACCGACGCGCTGGTGGGCGCGCCGCCGCCCGGCGTCGAACTGGTCGGCCCGGCGATGCCGTCGGGCCCGCGCG
GCGACGAGACGGCGTTCCCGTGGGAGCGCGTCGATGCGGATCGCCCGCTCGTCTACATGTCGCTCGGCAGCCAGCTTTAC
TACCACCCGGAGGTGTTCGCGAAGGTGATCGACGCGACGCGCGCGACCCCGGCGCAACTGGTGCTGTCGGTGGGCGAACT
GGTCGATTCGGATCTGTTGCCGGCCGGCGACGAACGCGTGATCGCGGTGCGTTACGCGCCGCAACTGACGCTGCTGCGGC
GCACGCACGCGTTCGTCAGCCACGGCGGCGCGAATTCGGTGATGGAGTCGCTCGCGTGCGGCGTGCCGATGCTGCTGTCG
CCGTTCTGCAACGACCAGTTCCATTCGGCGCATTTCGTCGAGCGGGCCGGCGCGGGCTGCGTGCTCGATCTGCAGCGGGC
CGGCGTTACGGACATTACGGATGCGCTCGAACGCCTGTTACGTGCCGGACCGTTGCGCGAGCAGGCGGCACGGATTCGCG
ACAGCTATGCCGCGTGCGACGGCTCCGCGCACGCCGCCCGCCTGATCAGCGCACTCGCTTCAGGAAGCCGCCTGGCGACA
GCGTCATGA

Upstream 100 bases:

>100_bases
GCGGATACCGAACGCGTGCTGTGGACGACGCTGACACTGCTCCTCGACCATCTCGATGGCCTTCATTCCGACGCCGCGCA
TCGCCCAACCTGAGCCGCTC

Downstream 100 bases:

>100_bases
GCACGCGGTCCTCGATGTCGTGGTCGATTTCGAAGCGGTCGTCGCGGGCGAGAAATTCACGGGCGGCCGTGGCCGGATTG
TTGCCGCGGCCGTACGGCTT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MKRILFCVVPEKGHVNPCIGPAQHLRAAGCDVAFYAPADISEQLDGAGDFAFVGPRETPERHDLSRGASFAANIRDADWL
RHWIRTLLIDLAPAQVDGIRTVLRDWRPDVVVIDPLLYAAAIAAELEGLPWVSMSNSLNPVLPDDLDSELLRTVRWLEPE
RTRLFARYGLDARFRGCDVLSPHLTLAFTTDALVGAPPPGVELVGPAMPSGPRGDETAFPWERVDADRPLVYMSLGSQLY
YHPEVFAKVIDATRATPAQLVLSVGELVDSDLLPAGDERVIAVRYAPQLTLLRRTHAFVSHGGANSVMESLACGVPMLLS
PFCNDQFHSAHFVERAGAGCVLDLQRAGVTDITDALERLLRAGPLREQAARIRDSYAACDGSAHAARLISALASGSRLAT
AS

Sequences:

>Translated_402_residues
MKRILFCVVPEKGHVNPCIGPAQHLRAAGCDVAFYAPADISEQLDGAGDFAFVGPRETPERHDLSRGASFAANIRDADWL
RHWIRTLLIDLAPAQVDGIRTVLRDWRPDVVVIDPLLYAAAIAAELEGLPWVSMSNSLNPVLPDDLDSELLRTVRWLEPE
RTRLFARYGLDARFRGCDVLSPHLTLAFTTDALVGAPPPGVELVGPAMPSGPRGDETAFPWERVDADRPLVYMSLGSQLY
YHPEVFAKVIDATRATPAQLVLSVGELVDSDLLPAGDERVIAVRYAPQLTLLRRTHAFVSHGGANSVMESLACGVPMLLS
PFCNDQFHSAHFVERAGAGCVLDLQRAGVTDITDALERLLRAGPLREQAARIRDSYAACDGSAHAARLISALASGSRLAT
AS
>Mature_402_residues
MKRILFCVVPEKGHVNPCIGPAQHLRAAGCDVAFYAPADISEQLDGAGDFAFVGPRETPERHDLSRGASFAANIRDADWL
RHWIRTLLIDLAPAQVDGIRTVLRDWRPDVVVIDPLLYAAAIAAELEGLPWVSMSNSLNPVLPDDLDSELLRTVRWLEPE
RTRLFARYGLDARFRGCDVLSPHLTLAFTTDALVGAPPPGVELVGPAMPSGPRGDETAFPWERVDADRPLVYMSLGSQLY
YHPEVFAKVIDATRATPAQLVLSVGELVDSDLLPAGDERVIAVRYAPQLTLLRRTHAFVSHGGANSVMESLACGVPMLLS
PFCNDQFHSAHFVERAGAGCVLDLQRAGVTDITDALERLLRAGPLREQAARIRDSYAACDGSAHAARLISALASGSRLAT
AS

Specific function: Unknown

COG id: COG1819

COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UDP-glycosyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002213
- InterPro:   IPR006326 [H]

Pfam domain/function: PF00201 UDPGT [H]

EC number: NA

Molecular weight: Translated: 43593; Mature: 43593

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRILFCVVPEKGHVNPCIGPAQHLRAAGCDVAFYAPADISEQLDGAGDFAFVGPRETPE
CCEEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHCCCCCEEEECCCCCCC
RHDLSRGASFAANIRDADWLRHWIRTLLIDLAPAQVDGIRTVLRDWRPDVVVIDPLLYAA
HHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECHHHHHH
AIAAELEGLPWVSMSNSLNPVLPDDLDSELLRTVRWLEPERTRLFARYGLDARFRGCDVL
HHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC
SPHLTLAFTTDALVGAPPPGVELVGPAMPSGPRGDETAFPWERVDADRPLVYMSLGSQLY
CCCEEEEEECCHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCEE
YHPEVFAKVIDATRATPAQLVLSVGELVDSDLLPAGDERVIAVRYAPQLTLLRRTHAFVS
ECHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHH
HGGANSVMESLACGVPMLLSPFCNDQFHSAHFVERAGAGCVLDLQRAGVTDITDALERLL
CCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCEEEEHHHCCCHHHHHHHHHHH
RAGPLREQAARIRDSYAACDGSAHAARLISALASGSRLATAS
HCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCC
>Mature Secondary Structure
MKRILFCVVPEKGHVNPCIGPAQHLRAAGCDVAFYAPADISEQLDGAGDFAFVGPRETPE
CCEEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHCCCCCEEEECCCCCCC
RHDLSRGASFAANIRDADWLRHWIRTLLIDLAPAQVDGIRTVLRDWRPDVVVIDPLLYAA
HHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECHHHHHH
AIAAELEGLPWVSMSNSLNPVLPDDLDSELLRTVRWLEPERTRLFARYGLDARFRGCDVL
HHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC
SPHLTLAFTTDALVGAPPPGVELVGPAMPSGPRGDETAFPWERVDADRPLVYMSLGSQLY
CCCEEEEEECCHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCEE
YHPEVFAKVIDATRATPAQLVLSVGELVDSDLLPAGDERVIAVRYAPQLTLLRRTHAFVS
ECHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHH
HGGANSVMESLACGVPMLLSPFCNDQFHSAHFVERAGAGCVLDLQRAGVTDITDALERLL
CCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCEEEEHHHCCCHHHHHHHHHHH
RAGPLREQAARIRDSYAACDGSAHAARLISALASGSRLATAS
HCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]