Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is yojK [H]
Identifier: 116689786
GI number: 116689786
Start: 1961502
End: 1962710
Strand: Reverse
Name: yojK [H]
Synonym: Bcen2424_1765
Alternate gene names: 116689786
Gene position: 1962710-1961502 (Counterclockwise)
Preceding gene: 116689787
Following gene: 116689784
Centisome position: 56.34
GC content: 69.73
Gene sequence:
>1209_bases ATGAAACGCATCCTGTTCTGCGTGGTGCCCGAGAAGGGCCACGTCAATCCGTGCATCGGCCCGGCCCAGCATCTGCGCGC AGCCGGCTGCGACGTCGCGTTCTATGCGCCGGCCGACATCAGCGAACAGCTCGACGGCGCCGGCGACTTCGCGTTCGTCG GGCCGCGCGAGACGCCCGAGCGCCACGACCTGTCGCGCGGCGCGAGTTTCGCCGCGAACATTCGCGACGCCGACTGGCTG CGGCACTGGATCCGCACGTTGCTGATCGACCTCGCGCCCGCGCAGGTGGACGGCATCCGAACAGTGCTGCGCGACTGGCG GCCTGACGTGGTCGTGATCGACCCGCTGCTCTATGCGGCGGCGATCGCGGCCGAGCTGGAAGGGCTGCCGTGGGTCTCGA TGTCCAATTCGCTGAATCCGGTGCTGCCGGACGATCTCGATTCGGAACTGCTGCGCACGGTGCGCTGGCTCGAACCGGAA CGCACGCGGCTGTTCGCGCGCTACGGCCTCGACGCGCGCTTTCGCGGTTGCGACGTGCTGTCGCCGCACCTGACGCTCGC GTTCACGACCGACGCGCTGGTGGGCGCGCCGCCGCCCGGCGTCGAACTGGTCGGCCCGGCGATGCCGTCGGGCCCGCGCG GCGACGAGACGGCGTTCCCGTGGGAGCGCGTCGATGCGGATCGCCCGCTCGTCTACATGTCGCTCGGCAGCCAGCTTTAC TACCACCCGGAGGTGTTCGCGAAGGTGATCGACGCGACGCGCGCGACCCCGGCGCAACTGGTGCTGTCGGTGGGCGAACT GGTCGATTCGGATCTGTTGCCGGCCGGCGACGAACGCGTGATCGCGGTGCGTTACGCGCCGCAACTGACGCTGCTGCGGC GCACGCACGCGTTCGTCAGCCACGGCGGCGCGAATTCGGTGATGGAGTCGCTCGCGTGCGGCGTGCCGATGCTGCTGTCG CCGTTCTGCAACGACCAGTTCCATTCGGCGCATTTCGTCGAGCGGGCCGGCGCGGGCTGCGTGCTCGATCTGCAGCGGGC CGGCGTTACGGACATTACGGATGCGCTCGAACGCCTGTTACGTGCCGGACCGTTGCGCGAGCAGGCGGCACGGATTCGCG ACAGCTATGCCGCGTGCGACGGCTCCGCGCACGCCGCCCGCCTGATCAGCGCACTCGCTTCAGGAAGCCGCCTGGCGACA GCGTCATGA
Upstream 100 bases:
>100_bases GCGGATACCGAACGCGTGCTGTGGACGACGCTGACACTGCTCCTCGACCATCTCGATGGCCTTCATTCCGACGCCGCGCA TCGCCCAACCTGAGCCGCTC
Downstream 100 bases:
>100_bases GCACGCGGTCCTCGATGTCGTGGTCGATTTCGAAGCGGTCGTCGCGGGCGAGAAATTCACGGGCGGCCGTGGCCGGATTG TTGCCGCGGCCGTACGGCTT
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MKRILFCVVPEKGHVNPCIGPAQHLRAAGCDVAFYAPADISEQLDGAGDFAFVGPRETPERHDLSRGASFAANIRDADWL RHWIRTLLIDLAPAQVDGIRTVLRDWRPDVVVIDPLLYAAAIAAELEGLPWVSMSNSLNPVLPDDLDSELLRTVRWLEPE RTRLFARYGLDARFRGCDVLSPHLTLAFTTDALVGAPPPGVELVGPAMPSGPRGDETAFPWERVDADRPLVYMSLGSQLY YHPEVFAKVIDATRATPAQLVLSVGELVDSDLLPAGDERVIAVRYAPQLTLLRRTHAFVSHGGANSVMESLACGVPMLLS PFCNDQFHSAHFVERAGAGCVLDLQRAGVTDITDALERLLRAGPLREQAARIRDSYAACDGSAHAARLISALASGSRLAT AS
Sequences:
>Translated_402_residues MKRILFCVVPEKGHVNPCIGPAQHLRAAGCDVAFYAPADISEQLDGAGDFAFVGPRETPERHDLSRGASFAANIRDADWL RHWIRTLLIDLAPAQVDGIRTVLRDWRPDVVVIDPLLYAAAIAAELEGLPWVSMSNSLNPVLPDDLDSELLRTVRWLEPE RTRLFARYGLDARFRGCDVLSPHLTLAFTTDALVGAPPPGVELVGPAMPSGPRGDETAFPWERVDADRPLVYMSLGSQLY YHPEVFAKVIDATRATPAQLVLSVGELVDSDLLPAGDERVIAVRYAPQLTLLRRTHAFVSHGGANSVMESLACGVPMLLS PFCNDQFHSAHFVERAGAGCVLDLQRAGVTDITDALERLLRAGPLREQAARIRDSYAACDGSAHAARLISALASGSRLAT AS >Mature_402_residues MKRILFCVVPEKGHVNPCIGPAQHLRAAGCDVAFYAPADISEQLDGAGDFAFVGPRETPERHDLSRGASFAANIRDADWL RHWIRTLLIDLAPAQVDGIRTVLRDWRPDVVVIDPLLYAAAIAAELEGLPWVSMSNSLNPVLPDDLDSELLRTVRWLEPE RTRLFARYGLDARFRGCDVLSPHLTLAFTTDALVGAPPPGVELVGPAMPSGPRGDETAFPWERVDADRPLVYMSLGSQLY YHPEVFAKVIDATRATPAQLVLSVGELVDSDLLPAGDERVIAVRYAPQLTLLRRTHAFVSHGGANSVMESLACGVPMLLS PFCNDQFHSAHFVERAGAGCVLDLQRAGVTDITDALERLLRAGPLREQAARIRDSYAACDGSAHAARLISALASGSRLAT AS
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glycosyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002213 - InterPro: IPR006326 [H]
Pfam domain/function: PF00201 UDPGT [H]
EC number: NA
Molecular weight: Translated: 43593; Mature: 43593
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILFCVVPEKGHVNPCIGPAQHLRAAGCDVAFYAPADISEQLDGAGDFAFVGPRETPE CCEEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHCCCCCEEEECCCCCCC RHDLSRGASFAANIRDADWLRHWIRTLLIDLAPAQVDGIRTVLRDWRPDVVVIDPLLYAA HHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECHHHHHH AIAAELEGLPWVSMSNSLNPVLPDDLDSELLRTVRWLEPERTRLFARYGLDARFRGCDVL HHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC SPHLTLAFTTDALVGAPPPGVELVGPAMPSGPRGDETAFPWERVDADRPLVYMSLGSQLY CCCEEEEEECCHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCEE YHPEVFAKVIDATRATPAQLVLSVGELVDSDLLPAGDERVIAVRYAPQLTLLRRTHAFVS ECHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHH HGGANSVMESLACGVPMLLSPFCNDQFHSAHFVERAGAGCVLDLQRAGVTDITDALERLL CCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCEEEEHHHCCCHHHHHHHHHHH RAGPLREQAARIRDSYAACDGSAHAARLISALASGSRLATAS HCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCC >Mature Secondary Structure MKRILFCVVPEKGHVNPCIGPAQHLRAAGCDVAFYAPADISEQLDGAGDFAFVGPRETPE CCEEEEEEECCCCCCCCCCCHHHHHHHCCCCEEEECCCCHHHHHCCCCCEEEECCCCCCC RHDLSRGASFAANIRDADWLRHWIRTLLIDLAPAQVDGIRTVLRDWRPDVVVIDPLLYAA HHHHHHCCHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECHHHHHH AIAAELEGLPWVSMSNSLNPVLPDDLDSELLRTVRWLEPERTRLFARYGLDARFRGCDVL HHHHHHCCCCEEECCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCC SPHLTLAFTTDALVGAPPPGVELVGPAMPSGPRGDETAFPWERVDADRPLVYMSLGSQLY CCCEEEEEECCHHCCCCCCCCEEECCCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCEE YHPEVFAKVIDATRATPAQLVLSVGELVDSDLLPAGDERVIAVRYAPQLTLLRRTHAFVS ECHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHH HGGANSVMESLACGVPMLLSPFCNDQFHSAHFVERAGAGCVLDLQRAGVTDITDALERLL CCCHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHCCCCEEEEHHHCCCHHHHHHHHHHH RAGPLREQAARIRDSYAACDGSAHAARLISALASGSRLATAS HCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]