Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689785
Identifier: 116689785
GI number: 116689785
Start: 1960856
End: 1961545
Strand: Direct
Name: 116689785
Synonym: Bcen2424_1764
Alternate gene names: NA
Gene position: 1960856-1961545 (Clockwise)
Preceding gene: 116689783
Following gene: 116689792
Centisome position: 56.28
GC content: 67.83
Gene sequence:
>690_bases ATGTCAGAGCGTCCTTCGGCCCGCATGCGGGACATCAACATCGAATGGCTGACGCGCGCCGCCGAATTCGGCCACCTGTT CCAGACCCGCTGGCTCGGCGAGCGTTTCTTCCATCTGCCCGGCGACATGCTCGCGCTGCAGGAACTGATCTGGCGCGAGC GCCCCGACTGCATCGTCCAGACCGGCATCGCGGCGGGCGGCGGCGTGGTGTTCACCGCGTCGATGCTCGAACTGGCCGGC GCCCCGGGCCGCGTCGTCGCGATCGAACCGCGCCTGCGCGACGAGGTCCGCCAGCGCCTGCACGCGCACCGGCTCGCCCA CCGCATGGTGCTGATCGAAGGCGAATCGTGCGCGGCCGACACGCTCGCGTCGGTGCGTGCACAGATCGACGACGGCGCGC GCGTGATGACGATCCTCGATCTCACGCATACGCACGCGCACGTGCTGCGCGAACTCGAATGCTATGCGCCGCTCGTGACG CCCGGCAGCTACGCGATCGTGATGGACACCATCATGGAGTACCTGCCCGAGTCGATGTTCGAAGGCAAGCCGTACGGCCG CGGCAACAATCCGGCCACGGCCGCCCGTGAATTTCTCGCCCGCGACGACCGCTTCGAAATCGACCACGACATCGAGGACC GCGTGCTCATGACGCTGTCGCCAGGCGGCTTCCTGAAGCGAGTGCGCTGA
Upstream 100 bases:
>100_bases GCCCGACGCCAGCGCCTGCAGGCGCGCCGGCCCGACGTTCCAGTACCGGTGAAGCCACGGTTCCAGCGTTTTCACGTCAC TCCTACTCGTTGCATCGACC
Downstream 100 bases:
>100_bases TCAGGCGGGCGGCGTGCGCGGAGCCGTCGCACGCGGCATAGCTGTCGCGAATCCGTGCCGCCTGCTCGCGCAACGGTCCG GCACGTAACAGGCGTTCGAG
Product: cephalosporin hydroxylase
Products: NA
Alternate protein names: Cephalosporin Hydroxylase Family Protein; Cephalosporin Protein; Preprotein Translocase ATPase Subunit; Cephalosporin Hydroxylase Cmci
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MSERPSARMRDINIEWLTRAAEFGHLFQTRWLGERFFHLPGDMLALQELIWRERPDCIVQTGIAAGGGVVFTASMLELAG APGRVVAIEPRLRDEVRQRLHAHRLAHRMVLIEGESCAADTLASVRAQIDDGARVMTILDLTHTHAHVLRELECYAPLVT PGSYAIVMDTIMEYLPESMFEGKPYGRGNNPATAAREFLARDDRFEIDHDIEDRVLMTLSPGGFLKRVR
Sequences:
>Translated_229_residues MSERPSARMRDINIEWLTRAAEFGHLFQTRWLGERFFHLPGDMLALQELIWRERPDCIVQTGIAAGGGVVFTASMLELAG APGRVVAIEPRLRDEVRQRLHAHRLAHRMVLIEGESCAADTLASVRAQIDDGARVMTILDLTHTHAHVLRELECYAPLVT PGSYAIVMDTIMEYLPESMFEGKPYGRGNNPATAAREFLARDDRFEIDHDIEDRVLMTLSPGGFLKRVR >Mature_228_residues SERPSARMRDINIEWLTRAAEFGHLFQTRWLGERFFHLPGDMLALQELIWRERPDCIVQTGIAAGGGVVFTASMLELAGA PGRVVAIEPRLRDEVRQRLHAHRLAHRMVLIEGESCAADTLASVRAQIDDGARVMTILDLTHTHAHVLRELECYAPLVTP GSYAIVMDTIMEYLPESMFEGKPYGRGNNPATAAREFLARDDRFEIDHDIEDRVLMTLSPGGFLKRVR
Specific function: Unknown
COG id: COG3510
COG function: function code V; Cephalosporin hydroxylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25847; Mature: 25716
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSERPSARMRDINIEWLTRAAEFGHLFQTRWLGERFFHLPGDMLALQELIWRERPDCIVQ CCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEE TGIAAGGGVVFTASMLELAGAPGRVVAIEPRLRDEVRQRLHAHRLAHRMVLIEGESCAAD CCCCCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHEEEEECCCHHHH TLASVRAQIDDGARVMTILDLTHTHAHVLRELECYAPLVTPGSYAIVMDTIMEYLPESMF HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHH EGKPYGRGNNPATAAREFLARDDRFEIDHDIEDRVLMTLSPGGFLKRVR CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHCCC >Mature Secondary Structure SERPSARMRDINIEWLTRAAEFGHLFQTRWLGERFFHLPGDMLALQELIWRERPDCIVQ CCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEE TGIAAGGGVVFTASMLELAGAPGRVVAIEPRLRDEVRQRLHAHRLAHRMVLIEGESCAAD CCCCCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHEEEEECCCHHHH TLASVRAQIDDGARVMTILDLTHTHAHVLRELECYAPLVTPGSYAIVMDTIMEYLPESMF HHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHHHHHHHHH EGKPYGRGNNPATAAREFLARDDRFEIDHDIEDRVLMTLSPGGFLKRVR CCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA