Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689748
Identifier: 116689748
GI number: 116689748
Start: 1919753
End: 1920115
Strand: Reverse
Name: 116689748
Synonym: Bcen2424_1727
Alternate gene names: NA
Gene position: 1920115-1919753 (Counterclockwise)
Preceding gene: 116689749
Following gene: 116689745
Centisome position: 55.11
GC content: 66.67
Gene sequence:
>363_bases ATGGACGACTATCTGATCGAATGCCAGAGCGCGGAATTCGATGCGCTCGCGCGCGTGATCTGCGATCTCTTTCCGGAGCA GACACGCTTCGCCGAAAGCAGCGACGAACGCGGGCGCTTCCTGTCCGTGCACTGGCTGGCGATGCGGTTCGGCGCGACGC CGAAGCGGATGACGCTCGACATCCGGATCGTGCCGGCCGCGCTCGCGCGCTACCTGGCGCTCAAGCCGATGCAGCGCGCG CGCAGCCATGCGGTGCTGCATGCGTATACGGAAGCGATGCTCGGCTCGCTCGAAGAGCGGCACGCGGCCGGCGAGGCCGT CGAGCGCGACGCGGAACTCGAACTCGACGAAGACTTTGCGTGA
Upstream 100 bases:
>100_bases GTGGGTCGAGGCCGCGTATGTCGTGCTGGTCGCGATCCTGGTGATCGCGCTGGTGAAGGCGTGCCGGCCGTCGCGTGCGG CGGCCTGACGGGAGAGCGCA
Downstream 100 bases:
>100_bases GCCGTGGCGCCGGTCTCGGCCGGCGCGGTGCGTTACGCGTTACGCGTCGCGGTAGACCTGCGCGAAGCGCTGCGCCTGCA CGACGCCGTAGTCGCCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MDDYLIECQSAEFDALARVICDLFPEQTRFAESSDERGRFLSVHWLAMRFGATPKRMTLDIRIVPAALARYLALKPMQRA RSHAVLHAYTEAMLGSLEERHAAGEAVERDAELELDEDFA
Sequences:
>Translated_120_residues MDDYLIECQSAEFDALARVICDLFPEQTRFAESSDERGRFLSVHWLAMRFGATPKRMTLDIRIVPAALARYLALKPMQRA RSHAVLHAYTEAMLGSLEERHAAGEAVERDAELELDEDFA >Mature_120_residues MDDYLIECQSAEFDALARVICDLFPEQTRFAESSDERGRFLSVHWLAMRFGATPKRMTLDIRIVPAALARYLALKPMQRA RSHAVLHAYTEAMLGSLEERHAAGEAVERDAELELDEDFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13644; Mature: 13644
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDYLIECQSAEFDALARVICDLFPEQTRFAESSDERGRFLSVHWLAMRFGATPKRMTLD CCCCEEEECCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCEEEE IRIVPAALARYLALKPMQRARSHAVLHAYTEAMLGSLEERHAAGEAVERDAELELDEDFA EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MDDYLIECQSAEFDALARVICDLFPEQTRFAESSDERGRFLSVHWLAMRFGATPKRMTLD CCCCEEEECCCCHHHHHHHHHHHCCCHHHHCCCCCCCCCEEHHHHHHHHHCCCCCCEEEE IRIVPAALARYLALKPMQRARSHAVLHAYTEAMLGSLEERHAAGEAVERDAELELDEDFA EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA