Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is tas [H]
Identifier: 116689610
GI number: 116689610
Start: 1748162
End: 1749214
Strand: Direct
Name: tas [H]
Synonym: Bcen2424_1588
Alternate gene names: 116689610
Gene position: 1748162-1749214 (Clockwise)
Preceding gene: 116689609
Following gene: 116689613
Centisome position: 50.18
GC content: 66.76
Gene sequence:
>1053_bases ATGGAATACCGCACACTCGGCGATTCGGGCATCGAGGTCAGCCTGATCGGTCTCGGCACGATGACGTGGGGCGAGCAGAA TTCGGAGCGCGACGCGCACGAGCAGATCGACTACGCGCTCGGGCACGGCGTGACGCTGATCGATGCCGCGGAGATGTATC CGGTGCCGCCGAAGCCCGACACGCAGGGCCGCACCGAGCAGTACATCGGCACCTGGATCGCGCAGCATCGCGCGCAGCGC GACCGCATCGTGCTCGCGACGAAGATCGCGGGGCCGGCGCGGCAGCCGCACAATCCGCGTCATATTCGCGGCGAGGGCAA CCAGTTCGACCGCAAGAACCTGACCGAAGCGCTCGACGGCAGCCTCAAGCGCCTGCAGACCGACTACGTCGATCTCTACC AACTGCATTGGCCCGATCGCAGCACGACCACCTTCGGCCGTCCTGCGTATCCGTGGGTCGACGACGCGTACACGGTGCCG ATCGAAGAAACGCTCGGTGTGCTCGCGGAATTCGTGAAGGCCGGCAAGGTGCGCGCGATCGGCGTGTCGAACGAAACGCC ATGGGGTGTCGCGCAGTTCCTGCGCGCGGCCGAGCGGCTCAGGCTGCCGCGTATCGCGAGCATCCAGAATCCGTACAGTC TGCTGAACCGCACGTTCGAGAACGGGCTGTCGGAGTTCACGCATCGCGACGGCGTCGGCCTGCTCGCGTATTCGCCGCTC GCATTCGGCTGGCTGTCGGGCAAGTACGAGAACGGCGCGCGTCCGGCCGGCGCGCGGATCACGCTGTTCGAGCGCTTCCA GCGTTACAGCAAGCCGCAGGCCGTCGAGGCGACGTCGCGTTACGTCGCGCTCGCGCAGCGTCACGGGCTGTCGCCCGCGC AACTGGCGCTCGCGTTCGTCAACAGCCGCCCGTTCGTGCGCAGCAACCTGGTCGGCGCGACGTCGCTCGAGCAGTTGAAG GAAAACATCGGCAGCGTCGACGTGACGCTGTCCGACGAGATCCTCGCCGAGATCGATGCATTGCACGAACGGCAGCCGAA CCCGGCGCCGTAA
Upstream 100 bases:
>100_bases GCAGCGCCGAAGGCCGCTTGTAAGCGTGCGCGGGGCCCATCTGAAGCAGTGGCTTCAATGTGATAGCGTTCCTGCTTTCC ACTGACGCGACAGGAACAGC
Downstream 100 bases:
>100_bases ACGGCGCGCGGCCCGCGCGGCAGCGATGCCGCGACGGGCCGAGTCGCACCGAGTCCGGCGGTTTCGGCGGCGCCTTGCTG CGCCGCCGTTTCTCGCGTCA
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 350
Protein sequence:
>350_residues MEYRTLGDSGIEVSLIGLGTMTWGEQNSERDAHEQIDYALGHGVTLIDAAEMYPVPPKPDTQGRTEQYIGTWIAQHRAQR DRIVLATKIAGPARQPHNPRHIRGEGNQFDRKNLTEALDGSLKRLQTDYVDLYQLHWPDRSTTTFGRPAYPWVDDAYTVP IEETLGVLAEFVKAGKVRAIGVSNETPWGVAQFLRAAERLRLPRIASIQNPYSLLNRTFENGLSEFTHRDGVGLLAYSPL AFGWLSGKYENGARPAGARITLFERFQRYSKPQAVEATSRYVALAQRHGLSPAQLALAFVNSRPFVRSNLVGATSLEQLK ENIGSVDVTLSDEILAEIDALHERQPNPAP
Sequences:
>Translated_350_residues MEYRTLGDSGIEVSLIGLGTMTWGEQNSERDAHEQIDYALGHGVTLIDAAEMYPVPPKPDTQGRTEQYIGTWIAQHRAQR DRIVLATKIAGPARQPHNPRHIRGEGNQFDRKNLTEALDGSLKRLQTDYVDLYQLHWPDRSTTTFGRPAYPWVDDAYTVP IEETLGVLAEFVKAGKVRAIGVSNETPWGVAQFLRAAERLRLPRIASIQNPYSLLNRTFENGLSEFTHRDGVGLLAYSPL AFGWLSGKYENGARPAGARITLFERFQRYSKPQAVEATSRYVALAQRHGLSPAQLALAFVNSRPFVRSNLVGATSLEQLK ENIGSVDVTLSDEILAEIDALHERQPNPAP >Mature_350_residues MEYRTLGDSGIEVSLIGLGTMTWGEQNSERDAHEQIDYALGHGVTLIDAAEMYPVPPKPDTQGRTEQYIGTWIAQHRAQR DRIVLATKIAGPARQPHNPRHIRGEGNQFDRKNLTEALDGSLKRLQTDYVDLYQLHWPDRSTTTFGRPAYPWVDDAYTVP IEETLGVLAEFVKAGKVRAIGVSNETPWGVAQFLRAAERLRLPRIASIQNPYSLLNRTFENGLSEFTHRDGVGLLAYSPL AFGWLSGKYENGARPAGARITLFERFQRYSKPQAVEATSRYVALAQRHGLSPAQLALAFVNSRPFVRSNLVGATSLEQLK ENIGSVDVTLSDEILAEIDALHERQPNPAP
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436969, Length=358, Percent_Identity=31.0055865921788, Blast_Score=135, Evalue=4e-32, Organism=Homo sapiens, GI27436964, Length=360, Percent_Identity=30.8333333333333, Blast_Score=135, Evalue=6e-32, Organism=Homo sapiens, GI4504825, Length=356, Percent_Identity=30.8988764044944, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI27436962, Length=360, Percent_Identity=30.8333333333333, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI27436966, Length=360, Percent_Identity=30.5555555555556, Blast_Score=132, Evalue=5e-31, Organism=Homo sapiens, GI27436971, Length=363, Percent_Identity=30.5785123966942, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI41152114, Length=240, Percent_Identity=30.4166666666667, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI41327764, Length=330, Percent_Identity=26.969696969697, Blast_Score=76, Evalue=5e-14, Organism=Homo sapiens, GI223718702, Length=306, Percent_Identity=27.7777777777778, Blast_Score=75, Evalue=8e-14, Organism=Escherichia coli, GI1789199, Length=350, Percent_Identity=57.1428571428571, Blast_Score=412, Evalue=1e-116, Organism=Escherichia coli, GI87081735, Length=356, Percent_Identity=29.2134831460674, Blast_Score=132, Evalue=3e-32, Organism=Escherichia coli, GI1789375, Length=348, Percent_Identity=32.183908045977, Blast_Score=124, Evalue=6e-30, Organism=Escherichia coli, GI1788070, Length=343, Percent_Identity=30.6122448979592, Blast_Score=121, Evalue=8e-29, Organism=Escherichia coli, GI1788081, Length=356, Percent_Identity=26.9662921348315, Blast_Score=80, Evalue=2e-16, Organism=Saccharomyces cerevisiae, GI6325169, Length=355, Percent_Identity=25.3521126760563, Blast_Score=96, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6323998, Length=347, Percent_Identity=26.8011527377522, Blast_Score=90, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6319958, Length=325, Percent_Identity=27.0769230769231, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6319951, Length=338, Percent_Identity=26.3313609467456, Blast_Score=84, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6324694, Length=248, Percent_Identity=31.0483870967742, Blast_Score=80, Evalue=4e-16, Organism=Saccharomyces cerevisiae, GI6322615, Length=270, Percent_Identity=25.9259259259259, Blast_Score=77, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6320576, Length=311, Percent_Identity=26.6881028938907, Blast_Score=73, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6320079, Length=235, Percent_Identity=29.7872340425532, Blast_Score=71, Evalue=2e-13, Organism=Drosophila melanogaster, GI24646159, Length=334, Percent_Identity=27.2455089820359, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI24646155, Length=343, Percent_Identity=27.6967930029155, Blast_Score=72, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 38999; Mature: 38999
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYRTLGDSGIEVSLIGLGTMTWGEQNSERDAHEQIDYALGHGVTLIDAAEMYPVPPKPD CCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHCCCCCCCC TQGRTEQYIGTWIAQHRAQRDRIVLATKIAGPARQPHNPRHIRGEGNQFDRKNLTEALDG CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCHHHHHHHHHH SLKRLQTDYVDLYQLHWPDRSTTTFGRPAYPWVDDAYTVPIEETLGVLAEFVKAGKVRAI HHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCEEEE GVSNETPWGVAQFLRAAERLRLPRIASIQNPYSLLNRTFENGLSEFTHRDGVGLLAYSPL ECCCCCCHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCH AFGWLSGKYENGARPAGARITLFERFQRYSKPQAVEATSRYVALAQRHGLSPAQLALAFV HHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH NSRPFVRSNLVGATSLEQLKENIGSVDVTLSDEILAEIDALHERQPNPAP CCCCCHHHCCCCHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEYRTLGDSGIEVSLIGLGTMTWGEQNSERDAHEQIDYALGHGVTLIDAAEMYPVPPKPD CCCCCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEHHHHCCCCCCCC TQGRTEQYIGTWIAQHRAQRDRIVLATKIAGPARQPHNPRHIRGEGNQFDRKNLTEALDG CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCHHHHHHHHHH SLKRLQTDYVDLYQLHWPDRSTTTFGRPAYPWVDDAYTVPIEETLGVLAEFVKAGKVRAI HHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCEEEE GVSNETPWGVAQFLRAAERLRLPRIASIQNPYSLLNRTFENGLSEFTHRDGVGLLAYSPL ECCCCCCHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCH AFGWLSGKYENGARPAGARITLFERFQRYSKPQAVEATSRYVALAQRHGLSPAQLALAFV HHHHHCCCCCCCCCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHH NSRPFVRSNLVGATSLEQLKENIGSVDVTLSDEILAEIDALHERQPNPAP CCCCCHHHCCCCHHHHHHHHHHHCCEEEEECHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9560382; 9278503 [H]