Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689600
Identifier: 116689600
GI number: 116689600
Start: 1741098
End: 1741493
Strand: Direct
Name: 116689600
Synonym: Bcen2424_1578
Alternate gene names: NA
Gene position: 1741098-1741493 (Clockwise)
Preceding gene: 116689598
Following gene: 116689602
Centisome position: 49.98
GC content: 58.59
Gene sequence:
>396_bases ATGTCGTCGAAACTCGAGATCGAATATCTCGATTACCGTTTCACCGCGACGCTCGAAATCACGGAGTCCGGTCGTACCGT CGTTGTCGACAGGCAGCTCGAATCCGAGACGCGAAGCAAGACGCTCGCGTGGATCGTGTTCGATCGGTTTCTGGCGCGCA ATGATTTCGCCGATGAAGAAGACGCACGCGCCAATATCGTCGCGTGGCTGGAGCAGCTTGCTGATCCGAGGCCCGTTGCA TCGACCGGGATTACGAAGGCGAGCGCGATGGTGACCGGGGTGGTGGCGACAGATTCGTCGACAGCCGGAATCGTCGGCGA TGCCGCCATTGAAATCGTCAGCAATCTCGACTGGATCGCTTGGGTTGCCGACTGGTTTTGCAGTGGCTCGTCGTAG
Upstream 100 bases:
>100_bases GCGTCCCGAGTGAAATTCACGCAAGATTCACACAGTGTCGCGAAGCGCGTCAGGCGCCGGGTATCATAAAAATTGAGAGG GCGGATTGAGCGGAGAAACC
Downstream 100 bases:
>100_bases CGAAGAATGCGCGTTTTCGTGACGCAGATCATTGTGGGCGCGAAATTCTGCACAAAAAACGGAGTGGAAATCGCCTGGTG TGAAAAAATAGAATAATCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSSKLEIEYLDYRFTATLEITESGRTVVVDRQLESETRSKTLAWIVFDRFLARNDFADEEDARANIVAWLEQLADPRPVA STGITKASAMVTGVVATDSSTAGIVGDAAIEIVSNLDWIAWVADWFCSGSS
Sequences:
>Translated_131_residues MSSKLEIEYLDYRFTATLEITESGRTVVVDRQLESETRSKTLAWIVFDRFLARNDFADEEDARANIVAWLEQLADPRPVA STGITKASAMVTGVVATDSSTAGIVGDAAIEIVSNLDWIAWVADWFCSGSS >Mature_130_residues SSKLEIEYLDYRFTATLEITESGRTVVVDRQLESETRSKTLAWIVFDRFLARNDFADEEDARANIVAWLEQLADPRPVAS TGITKASAMVTGVVATDSSTAGIVGDAAIEIVSNLDWIAWVADWFCSGSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14382; Mature: 14251
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKLEIEYLDYRFTATLEITESGRTVVVDRQLESETRSKTLAWIVFDRFLARNDFADEE CCCCEEEEEEEEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC DARANIVAWLEQLADPRPVASTGITKASAMVTGVVATDSSTAGIVGDAAIEIVSNLDWIA CHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEEEEEECCCCCCCHHHHHHHHHHCCHHHH WVADWFCSGSS HHHHHHCCCCC >Mature Secondary Structure SSKLEIEYLDYRFTATLEITESGRTVVVDRQLESETRSKTLAWIVFDRFLARNDFADEE CCCEEEEEEEEEEEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC DARANIVAWLEQLADPRPVASTGITKASAMVTGVVATDSSTAGIVGDAAIEIVSNLDWIA CHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEEEEEEECCCCCCCHHHHHHHHHHCCHHHH WVADWFCSGSS HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA