Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
---|---|
Accession | NC_008542 |
Length | 3,483,902 |
Click here to switch to the map view.
The map label for this gene is 116689598
Identifier: 116689598
GI number: 116689598
Start: 1739723
End: 1740238
Strand: Direct
Name: 116689598
Synonym: Bcen2424_1576
Alternate gene names: NA
Gene position: 1739723-1740238 (Clockwise)
Preceding gene: 116689597
Following gene: 116689600
Centisome position: 49.94
GC content: 64.53
Gene sequence:
>516_bases ATGCCGGACACCCGGACCACACTGCGCGCGGCCACGCCCCACGACGCGAACCACATCGCTCGCCTGCACACGCTGAGCTG GCAAACCGCCTATAGCCATATCCTTCCGGCCAGCTATCTGTCCGACGACGTGCCGACGGAACACGCGGTCCGGTGGCGCA AATACTTCGATAGAAACGCGAACGAGTGGGGCCTCGTGCTGATTGCCGAGTCGAATGGTGATCCGGTCGGTTTCGTCAGC GCCGAACGCCCCGTCGACCCGGCGCTTGGCGTGTTGCTCGACTGCCTGCACGTCCATCCTTCGCATCACGGCGGCGGCAC GGGCAAGCGCATGATCGAAGCCGTTCGCGCGTGGGCCCGGTCGATCGGCGTGGAGAAGGTCCATCTGCAGGTGCTGGAGG GCAACGTGCGTGCGATCGGGTTCTACGAGCACAACGGCTGGCAATTGGCCGGTGTCGAAACCAGCCGCATCGGCCAGACG GAAGTCACCGATCGGATTTATGCGATCCGGGCTTGA
Upstream 100 bases:
>100_bases CTCCCGACGACGGGCCACTGCGAAATGCATCTCGCAAAGCACGGTATATTTTGCGACGACACACGTCGACCAAGAAAATC TGCAGAAGGAGTTGCTACCG
Downstream 100 bases:
>100_bases ACGTTTGCCGGTTCGATGTAGCGACGGCAAGCGAGTGCACCTGCGCTTGGCCGCAATGGAAGCGCCAGGTGAAAGCCGCC CGGACTTTGCCGTCACTCGC
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase; Transcriptional Regulator; GNAT Family N-Acetyltransferase; GNAT Family Acetyltransferase; GCN5 N-Acetyltransferase; Acetyltransferase Family Protein
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MPDTRTTLRAATPHDANHIARLHTLSWQTAYSHILPASYLSDDVPTEHAVRWRKYFDRNANEWGLVLIAESNGDPVGFVS AERPVDPALGVLLDCLHVHPSHHGGGTGKRMIEAVRAWARSIGVEKVHLQVLEGNVRAIGFYEHNGWQLAGVETSRIGQT EVTDRIYAIRA
Sequences:
>Translated_171_residues MPDTRTTLRAATPHDANHIARLHTLSWQTAYSHILPASYLSDDVPTEHAVRWRKYFDRNANEWGLVLIAESNGDPVGFVS AERPVDPALGVLLDCLHVHPSHHGGGTGKRMIEAVRAWARSIGVEKVHLQVLEGNVRAIGFYEHNGWQLAGVETSRIGQT EVTDRIYAIRA >Mature_170_residues PDTRTTLRAATPHDANHIARLHTLSWQTAYSHILPASYLSDDVPTEHAVRWRKYFDRNANEWGLVLIAESNGDPVGFVSA ERPVDPALGVLLDCLHVHPSHHGGGTGKRMIEAVRAWARSIGVEKVHLQVLEGNVRAIGFYEHNGWQLAGVETSRIGQTE VTDRIYAIRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19017; Mature: 18885
Theoretical pI: Translated: 7.14; Mature: 7.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDTRTTLRAATPHDANHIARLHTLSWQTAYSHILPASYLSDDVPTEHAVRWRKYFDRNA CCCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCC NEWGLVLIAESNGDPVGFVSAERPVDPALGVLLDCLHVHPSHHGGGTGKRMIEAVRAWAR CCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH SIGVEKVHLQVLEGNVRAIGFYEHNGWQLAGVETSRIGQTEVTDRIYAIRA HCCCCEEEEEEEECCEEEEEEEECCCEEEECCCHHHCCCHHHHCEEEEECC >Mature Secondary Structure PDTRTTLRAATPHDANHIARLHTLSWQTAYSHILPASYLSDDVPTEHAVRWRKYFDRNA CCCCCEEEECCCCCCHHHHHHHHCCHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHCCCC NEWGLVLIAESNGDPVGFVSAERPVDPALGVLLDCLHVHPSHHGGGTGKRMIEAVRAWAR CCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH SIGVEKVHLQVLEGNVRAIGFYEHNGWQLAGVETSRIGQTEVTDRIYAIRA HCCCCEEEEEEEECCEEEEEEEECCCEEEECCCHHHCCCHHHHCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA