Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689592
Identifier: 116689592
GI number: 116689592
Start: 1732551
End: 1733174
Strand: Reverse
Name: 116689592
Synonym: Bcen2424_1570
Alternate gene names: NA
Gene position: 1733174-1732551 (Counterclockwise)
Preceding gene: 116689595
Following gene: 116689591
Centisome position: 49.75
GC content: 67.79
Gene sequence:
>624_bases ATGACCACCGATAAGAGCCGCGCTGATGCGCTGACGGCACAAGTTGCACTTGCCGCGATCGAAATGTTGGAAACCGGCCG CGAGTACCGCTTCGACGGCGCGGTGCCAAACGCCAAACGCGACGGTGTGCTGCCGGCGTGGTGGCGTCGCCCGTCGATCT TCATGCCGAGCACCGCCGCGCGCACGCTGTTCGAAGTGCCTGGCGTGTGCGTGGAGCGCCTTCAATCGATCAGCGACGTA AATGCGATCTCCGAAGGAATTGAGCGGACATCCGACGGCTTCAGCGTCGACGGCAGCCGCCACTTCCCCGCAGCTCGGGC GCGCGACTCGTTCGCGTCGCTCTGGGGCGGCATCAACGCCGAAGCCGGCCACGGCGGGGGGGACACGAACCCGCTCCTGT GGGTCGTCGAATTCAGAAGGATCACCCCGCGTGATGGCGATAGACCAGTCCGCGCGGATCGCGGACAATCTCGCAGCCGT CGCGGCCACGCGGGACGCGATGCGCGGGATCGAGCGGCGCGGCGGCGCCCGCATCCTAGAATGAGCGTTCACCGGGTTCG CCACGCTTGCGGCACCCGGCCACGCGCGGCACTGGCGCGAGGTGATCGGCATGCCGCTCACTGA
Upstream 100 bases:
>100_bases TTAATCCATTTACCCCCGAGCATCGAAGCTCCATTAGCGAGCTTTCTGCTACGTCGCACTGTGAAAAATAGGTGCGTCCA CCGATTTCCTGAAGATCACC
Downstream 100 bases:
>100_bases ACAGCTCGACCGACCGGCGGCCGTGCGAGGCGATAAAGAGTGCCTCTCCGTCTTCACGACGAAGTTCGGGACGCGCACTA CACGCACGACGGATTCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MTTDKSRADALTAQVALAAIEMLETGREYRFDGAVPNAKRDGVLPAWWRRPSIFMPSTAARTLFEVPGVCVERLQSISDV NAISEGIERTSDGFSVDGSRHFPAARARDSFASLWGGINAEAGHGGGDTNPLLWVVEFRRITPRDGDRPVRADRGQSRSR RGHAGRDARDRAARRRPHPRMSVHRVRHACGTRPRAALARGDRHAAH
Sequences:
>Translated_207_residues MTTDKSRADALTAQVALAAIEMLETGREYRFDGAVPNAKRDGVLPAWWRRPSIFMPSTAARTLFEVPGVCVERLQSISDV NAISEGIERTSDGFSVDGSRHFPAARARDSFASLWGGINAEAGHGGGDTNPLLWVVEFRRITPRDGDRPVRADRGQSRSR RGHAGRDARDRAARRRPHPRMSVHRVRHACGTRPRAALARGDRHAAH >Mature_206_residues TTDKSRADALTAQVALAAIEMLETGREYRFDGAVPNAKRDGVLPAWWRRPSIFMPSTAARTLFEVPGVCVERLQSISDVN AISEGIERTSDGFSVDGSRHFPAARARDSFASLWGGINAEAGHGGGDTNPLLWVVEFRRITPRDGDRPVRADRGQSRSRR GHAGRDARDRAARRRPHPRMSVHRVRHACGTRPRAALARGDRHAAH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22834; Mature: 22703
Theoretical pI: Translated: 11.85; Mature: 11.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDKSRADALTAQVALAAIEMLETGREYRFDGAVPNAKRDGVLPAWWRRPSIFMPSTAA CCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHCCCCCCCCCHHH RTLFEVPGVCVERLQSISDVNAISEGIERTSDGFSVDGSRHFPAARARDSFASLWGGINA HHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC EAGHGGGDTNPLLWVVEFRRITPRDGDRPVRADRGQSRSRRGHAGRDARDRAARRRPHPR CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCC MSVHRVRHACGTRPRAALARGDRHAAH HHHHHHHHHHCCCHHHHHHCCCCCCCC >Mature Secondary Structure TTDKSRADALTAQVALAAIEMLETGREYRFDGAVPNAKRDGVLPAWWRRPSIFMPSTAA CCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHCCCCCCCCCHHH RTLFEVPGVCVERLQSISDVNAISEGIERTSDGFSVDGSRHFPAARARDSFASLWGGINA HHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCC EAGHGGGDTNPLLWVVEFRRITPRDGDRPVRADRGQSRSRRGHAGRDARDRAARRRPHPR CCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHCCCCCC MSVHRVRHACGTRPRAALARGDRHAAH HHHHHHHHHHCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA