Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
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Accession | NC_008542 |
Length | 3,483,902 |
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The map label for this gene is 116689510
Identifier: 116689510
GI number: 116689510
Start: 1642511
End: 1642768
Strand: Reverse
Name: 116689510
Synonym: Bcen2424_1488
Alternate gene names: NA
Gene position: 1642768-1642511 (Counterclockwise)
Preceding gene: 116689511
Following gene: 116689506
Centisome position: 47.15
GC content: 61.63
Gene sequence:
>258_bases ATGAGCAACATTCAACTCGACATCGAGTGGACCGAAGCCGCCACTCGCCAGATCAAGCAACTGATGCCCCGCGGCTCGGA CGACGCGTTTCTCGCGCTGCCGCCGATCGAATGCCTGCCGATGGAGGGCGACGTGCTGTTCCTCGGCCCGCAAGGCAAGC AGCAACCGTTCATCGTTGCCGAGCGTCAGTATCACCATGACGGCGATGCCGACTGGACGATCATCCTGATCCTCGACGTA CCCAGCGCATCGCACTGA
Upstream 100 bases:
>100_bases GGTAACCGGGTTCGGCTTTTTTGGTTGCGGCGCCCGCGCGCTGTGCTAAAGTCGCGCACCGAAATTTTCCACCCGTGCGC ACCCCGGTGCGGAGGACAGC
Downstream 100 bases:
>100_bases CGCGCCGCCGCGACCGGACACGTCCGGTCGCCCTACCCGGCTCGGACTCAGACGAGCTTCGACAGCACGCGGATTTCGGA ACGCTCGATCCAGTCCGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSNIQLDIEWTEAATRQIKQLMPRGSDDAFLALPPIECLPMEGDVLFLGPQGKQQPFIVAERQYHHDGDADWTIILILDV PSASH
Sequences:
>Translated_85_residues MSNIQLDIEWTEAATRQIKQLMPRGSDDAFLALPPIECLPMEGDVLFLGPQGKQQPFIVAERQYHHDGDADWTIILILDV PSASH >Mature_84_residues SNIQLDIEWTEAATRQIKQLMPRGSDDAFLALPPIECLPMEGDVLFLGPQGKQQPFIVAERQYHHDGDADWTIILILDVP SASH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9541; Mature: 9410
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIQLDIEWTEAATRQIKQLMPRGSDDAFLALPPIECLPMEGDVLFLGPQGKQQPFIVA CCCEEEEEEECHHHHHHHHHHCCCCCCCCEEEECCCEEEECCCCEEEECCCCCCCCEEEE ERQYHHDGDADWTIILILDVPSASH ECEECCCCCCCEEEEEEEECCCCCC >Mature Secondary Structure SNIQLDIEWTEAATRQIKQLMPRGSDDAFLALPPIECLPMEGDVLFLGPQGKQQPFIVA CCEEEEEEECHHHHHHHHHHCCCCCCCCEEEECCCEEEECCCCEEEECCCCCCCCEEEE ERQYHHDGDADWTIILILDVPSASH ECEECCCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA