| Definition | Burkholderia cenocepacia HI2424 chromosome 1, complete sequence. |
|---|---|
| Accession | NC_008542 |
| Length | 3,483,902 |
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The map label for this gene is aroC [H]
Identifier: 116689482
GI number: 116689482
Start: 1614583
End: 1615683
Strand: Direct
Name: aroC [H]
Synonym: Bcen2424_1460
Alternate gene names: 116689482
Gene position: 1614583-1615683 (Clockwise)
Preceding gene: 116689481
Following gene: 116689484
Centisome position: 46.34
GC content: 68.21
Gene sequence:
>1101_bases ATGTCCGGCAATACCCTCGGCACGCTTTTCACTGTCACGACCTTCGGCGAATCGCACGGTCCCGCGATCGGCTGCGTGAT CGACGGCTGCCCGCCGGGGATGGGACTGACCGAAGCCGATATCCAGATCGAACTCGATCGCCGCAAGCCGGGCACGTCGC GGCACGTGACGCAACGGCAGGAGGCCGACGAGGTCGAGATCCTGTCGGGCGTGTTCGAAGGCGTGACGACCGGCACGCCG ATCGCGCTGCTGATCCGCAACACCGACCAGCGCAGCAAGGACTACGGCAACATCGTCGAGACGTTCCGTCCCGGCCACGC CGACTACACCTACTGGCAGAAATACGGCATCCGCGACTACCGCGGCGGCGGTCGCTCGTCCGCGCGCCTCACCGCGCCGA TCGTCGGCGCCGGTGCGGTCGCGAAGAAGTGGCTGCGCGAGCGCTTCGGGGTCGAGGTGCGCGGCTACATGAGCGGCCTC GGCGAAATCGACGTGCCGTTCGTCGACTGGTCGCACGTGCACGAGAATCCGTTCTTCTCGCCGAACGCGGCGGTCGTGCC GGAGCTCGAGGCGTACATGGACGCGCTGCGCAAGGATGGCGATTCGATCGGCGCGCGCATCGACGTCGTCGCATCGGGCG TGCCGGTCGGCTGGGGCGAACCGGTATTCGACCGGCTCGATGCCGATATCGCGAAGGCGATGATGAGCATCAACGCGGTG AAGGGCGTCGAGATCGGCGCGGGCTTCGACAGCGTCGCGCAGCGCGGCTCGGTGCATGGCGACGAACTGACGCCGGCCGG CTTCGTCGGCAACCACGCGGGCGGCGTGCTCGGCGGGATTTCGACGGGGCAGGACATCACCGTGTCGATCGCGATCAAGC CGACGTCGAGCATCCGCACGCCGCGCCGCTCGATCACGAAGAGCGGCGACGAGGCGACGGTCGAAACCTTCGGCCGCCAC GATCCGTGCGTCGGCATTCGCGCGACGCCGATCGCCGAATCGATGCTCGCGCTGGTGCTGATCGACCATGCGCTGCGCCA TCGCGCGCAGTGCGGCGACGTCGAGACGTCGACGCCGAAGATTGCCGGCAGCGCGACCTGA
Upstream 100 bases:
>100_bases TATAGGTATTCTTATATTCCACGACTTCCAAAATATAGGTCTGTCTATATTTCGACAGACGATGTATTGGCTTGTCTAAT TCTCTTTGGGCGGTTCCATC
Downstream 100 bases:
>100_bases TAGAGGCGGGCGGGGCGCCCTGTGTCGCCTCGGCAGTGGAGCGATGAATGCAAGCGGGGCGCTGCGTGATGCAGCGCCCC GTTTCGTTTACGGCGGTTCG
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase [H]
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MSGNTLGTLFTVTTFGESHGPAIGCVIDGCPPGMGLTEADIQIELDRRKPGTSRHVTQRQEADEVEILSGVFEGVTTGTP IALLIRNTDQRSKDYGNIVETFRPGHADYTYWQKYGIRDYRGGGRSSARLTAPIVGAGAVAKKWLRERFGVEVRGYMSGL GEIDVPFVDWSHVHENPFFSPNAAVVPELEAYMDALRKDGDSIGARIDVVASGVPVGWGEPVFDRLDADIAKAMMSINAV KGVEIGAGFDSVAQRGSVHGDELTPAGFVGNHAGGVLGGISTGQDITVSIAIKPTSSIRTPRRSITKSGDEATVETFGRH DPCVGIRATPIAESMLALVLIDHALRHRAQCGDVETSTPKIAGSAT
Sequences:
>Translated_366_residues MSGNTLGTLFTVTTFGESHGPAIGCVIDGCPPGMGLTEADIQIELDRRKPGTSRHVTQRQEADEVEILSGVFEGVTTGTP IALLIRNTDQRSKDYGNIVETFRPGHADYTYWQKYGIRDYRGGGRSSARLTAPIVGAGAVAKKWLRERFGVEVRGYMSGL GEIDVPFVDWSHVHENPFFSPNAAVVPELEAYMDALRKDGDSIGARIDVVASGVPVGWGEPVFDRLDADIAKAMMSINAV KGVEIGAGFDSVAQRGSVHGDELTPAGFVGNHAGGVLGGISTGQDITVSIAIKPTSSIRTPRRSITKSGDEATVETFGRH DPCVGIRATPIAESMLALVLIDHALRHRAQCGDVETSTPKIAGSAT >Mature_365_residues SGNTLGTLFTVTTFGESHGPAIGCVIDGCPPGMGLTEADIQIELDRRKPGTSRHVTQRQEADEVEILSGVFEGVTTGTPI ALLIRNTDQRSKDYGNIVETFRPGHADYTYWQKYGIRDYRGGGRSSARLTAPIVGAGAVAKKWLRERFGVEVRGYMSGLG EIDVPFVDWSHVHENPFFSPNAAVVPELEAYMDALRKDGDSIGARIDVVASGVPVGWGEPVFDRLDADIAKAMMSINAVK GVEIGAGFDSVAQRGSVHGDELTPAGFVGNHAGGVLGGISTGQDITVSIAIKPTSSIRTPRRSITKSGDEATVETFGRHD PCVGIRATPIAESMLALVLIDHALRHRAQCGDVETSTPKIAGSAT
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family [H]
Homologues:
Organism=Escherichia coli, GI1788669, Length=360, Percent_Identity=66.3888888888889, Blast_Score=474, Evalue=1e-135, Organism=Saccharomyces cerevisiae, GI6321290, Length=367, Percent_Identity=43.5967302452316, Blast_Score=289, Evalue=6e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000453 - InterPro: IPR020541 [H]
Pfam domain/function: PF01264 Chorismate_synt [H]
EC number: =4.2.3.5 [H]
Molecular weight: Translated: 38885; Mature: 38754
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1 ; PS00788 CHORISMATE_SYNTHASE_2 ; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGNTLGTLFTVTTFGESHGPAIGCVIDGCPPGMGLTEADIQIELDRRKPGTSRHVTQRQ CCCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCEECEEEEEECCCCCCCCHHHHHHH EADEVEILSGVFEGVTTGTPIALLIRNTDQRSKDYGNIVETFRPGHADYTYWQKYGIRDY CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCC RGGGRSSARLTAPIVGAGAVAKKWLRERFGVEVRGYMSGLGEIDVPFVDWSHVHENPFFS CCCCCCCCEEECCEECCHHHHHHHHHHHHCCEEEHHHCCCCCCCCCCCCHHHCCCCCCCC PNAAVVPELEAYMDALRKDGDSIGARIDVVASGVPVGWGEPVFDRLDADIAKAMMSINAV CCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH KGVEIGAGFDSVAQRGSVHGDELTPAGFVGNHAGGVLGGISTGQDITVSIAIKPTSSIRT CCEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCHHCCC PRRSITKSGDEATVETFGRHDPCVGIRATPIAESMLALVLIDHALRHRAQCGDVETSTPK CHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC IAGSAT CCCCCC >Mature Secondary Structure SGNTLGTLFTVTTFGESHGPAIGCVIDGCPPGMGLTEADIQIELDRRKPGTSRHVTQRQ CCCEEEEEEEEEECCCCCCCEEEEEEECCCCCCCCEECEEEEEECCCCCCCCHHHHHHH EADEVEILSGVFEGVTTGTPIALLIRNTDQRSKDYGNIVETFRPGHADYTYWQKYGIRDY CCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHCCCCCC RGGGRSSARLTAPIVGAGAVAKKWLRERFGVEVRGYMSGLGEIDVPFVDWSHVHENPFFS CCCCCCCCEEECCEECCHHHHHHHHHHHHCCEEEHHHCCCCCCCCCCCCHHHCCCCCCCC PNAAVVPELEAYMDALRKDGDSIGARIDVVASGVPVGWGEPVFDRLDADIAKAMMSINAV CCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHH KGVEIGAGFDSVAQRGSVHGDELTPAGFVGNHAGGVLGGISTGQDITVSIAIKPTSSIRT CCEEECCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCHHCCC PRRSITKSGDEATVETFGRHDPCVGIRATPIAESMLALVLIDHALRHRAQCGDVETSTPK CHHHHHCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC IAGSAT CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA